RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MAPK8P45983 427 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 MCM2P49736 904 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 GATMP50440 423 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 NPEPPSP55786 919 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 FAM189BP81408 668 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 GUCY1B3Q02153 619 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 TFF2Q03403 129 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 CTTNQ14247 550 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 PAN2Q504Q3 1202 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 TTC39BQ5VTQ0 682 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 RHPN2Q8IUC4 686 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 NOSTRINQ8IVI9 506 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 LRRC43Q8N309 656 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 TCP11Q8WWU5 503 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 PSPC1Q8WXF1 523 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 RSPH1Q8WYR4 309 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 PMEPA1Q969W9 287 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 DYDC2Q96IM9 177 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 NLRP4Q96MN2 994 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 TBC1D32Q96NH3 1257 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 HSD17B14Q9BPX1 270 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 EIF2AK1Q9BQI3 630 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 INO80BQ9C086 356 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 NSUN3Q9H649 340 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 ATP6V0A4Q9HBG4 840 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 CHST12Q9NRB3 414 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 SUCLA2Q9P2R7 463 aaPredicted RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 DMGDHQ9UI17 866 aaKnown RBP8.55□□□□□ -1.04
SNHG1-223ENST00000545440 COL4A3BPQ9Y5P4 624 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 DENND4AQ7Z401 1863 aa8.55□□□□□ -1.04
SNHG1-223ENST00000545440 C2orf16Q68DN1 1984 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 A0A087WZ62 844 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 A0A0U1RQF3 1178 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TBKBP1A7MCY6 615 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 GRM6O15303 877 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 U2AF2P26368 475 aaKnown RBP eCLIP8.54□□□□□ -1.042e-8■■■■□ 21.3
SNHG1-223ENST00000545440 TXKP42681 527 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 RAB27AP51159 221 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 KCNQ1P51787 676 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 PCBP1Q15365 356 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 XKR9Q5GH70 373 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TTC38Q5R3I4 469 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 FERMT3Q86UX7 667 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ECHDC2Q86YB7 292 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TPH2Q8IWU9 490 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 GIPC2Q8TF65 315 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ZNF668Q96K58 619 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 FAM129BQ96TA1 746 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 NIF3L1Q9GZT8 377 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TMEM117Q9H0C3 514 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TMEM60Q9H2L4 133 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 UBE2ZQ9H832 354 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 IFT122Q9HBG6 1241 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 TUFT1Q9NNX1 390 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ANKEF1Q9NU02 776 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 AGPAT5Q9NUQ2 364 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 MARK1Q9P0L2 795 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 NOL7Q9UMY1 257 aaKnown RBP8.54□□□□□ -1.04
SNHG1-223ENST00000545440 PLAGL2Q9UPG8 496 aa8.54□□□□□ -1.04
SNHG1-223ENST00000545440 PLXNA3P51805 1871 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 ASAP2O43150 1006 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 NCK2O43639 380 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 EOMESO95936 686 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 ITGB1P05556 798 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 FGFR1P11362 822 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 ATF7P17544 494 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 LAG3P18627 525 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 FGFR4P22455 802 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 RARRES1P49788 294 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 UBE3AQ05086 875 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 LAMTOR4Q0VGL1 99 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 CCINQ13939 588 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 MXD4Q14582 209 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 TCEAL5Q5H9L2 206 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 FAM102BQ5T8I3 360 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 HAUS3Q68CZ6 603 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 ALG1LQ6GMV1 187 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 TWF2Q6IBS0 349 aaKnown RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 CATSPER4Q7RTX7 472 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 SRGAP1Q7Z6B7 1085 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 KSR1Q8IVT5 923 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 ERMNQ8TAM6 284 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 PPP2R3CQ969Q6 453 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 TMEM143Q96AN5 459 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 PABPC5Q96DU9 382 aaKnown RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 TMX3Q96JJ7 454 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms