RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 MRPL44Q9H9J2 332 aaKnown RBP17.19■□□□□ 0.34
CCDC78-216ENST00000544996 MYO7AQ13402 2215 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 F8W810 466 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 TNFRSF10AO00220 468 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 C2CD2LO14523 706 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 MBTPS2O43462 519 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 CLASP2O75122 1294 aaKnown RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 PIGRP01833 764 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 IL9P15248 144 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 GLUD2P49448 558 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 KCNC3Q14003 757 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 NAB2Q15742 525 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 SMAD2Q15796 467 aaKnown RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 USP41Q3LFD5 358 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 XKR4Q5GH76 650 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 HERC4Q5GLZ8 1057 aaPredicted RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 ALKAL1Q6UXT8 129 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 MAP4K3Q8IVH8 894 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 SMRP1Q8NCR6 262 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 DHX58Q96C10 678 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 HVCN1Q96D96 273 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 DNAJC19Q96DA6 116 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 UROC1Q96N76 676 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 FIZ1Q96SL8 496 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 PYM1Q9BRP8 204 aaKnown RBP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 HCFC2Q9Y5Z7 792 aa17.18■□□□□ 0.34
CCDC78-216ENST00000544996 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC78-216ENST00000544996 CLTAP09496 248 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 KCNE1P15382 129 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 KLRC2P26717 231 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 ELAVL2Q12926 359 aaKnown RBP17.17■□□□□ 0.34
CCDC78-216ENST00000544996 E2F4Q16254 413 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 ZC2HC1CQ53FD0 456 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-216ENST00000544996 RESP18Q5W5W9 173 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 RNF168Q8IYW5 571 aaPredicted RBP17.17■□□□□ 0.34
CCDC78-216ENST00000544996 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
CCDC78-216ENST00000544996 SNX27Q96L92 541 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 SPATA32Q96LK8 384 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 PAAF1Q9BRP4 392 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 PLEKHA5Q9HAU0 1116 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 MAGEF1Q9HAY2 307 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 OLFML3Q9NRN5 406 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 CHST7Q9NS84 486 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 PANK4Q9NVE7 773 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 CACNG4Q9UBN1 327 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
CCDC78-216ENST00000544996 ATG2AQ2TAZ0 1938 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 OGTO15294 1046 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
CCDC78-216ENST00000544996 LILRB3O75022 631 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 B3GAT3O94766 335 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 KIF4AO95239 1232 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 GCNT3O95395 438 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 EFEMP2O95967 443 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 ADH1AP07327 375 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 CNPP09543 421 aaKnown RBP17.16■□□□□ 0.34
CCDC78-216ENST00000544996 DSG1Q02413 1049 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 ALCAMQ13740 583 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 SEZ6Q53EL9 994 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 KIAA0319Q5VV43 1072 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 SLFN12LQ6IEE8 588 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 DCLRE1AQ6PJP8 1040 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 STAMQ92783 540 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 KLHL5Q96PQ7 755 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC78-216ENST00000544996 KBTBD4Q9NVX7 518 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 TBC1D7Q9P0N9 293 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 CNTN3Q9P232 1028 aa17.16■□□□□ 0.34
CCDC78-216ENST00000544996 A0A0B4J269 797 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 TRAPPC3O43617 180 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 CLCNKBP51801 687 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 CREMQ03060 361 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 FAM171A1Q5VUB5 890 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 ELMSAN1Q6PJG2 1045 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 STXBP4Q6ZWJ1 553 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
CCDC78-216ENST00000544996 LEO1Q8WVC0 666 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-216ENST00000544996 B3GALT6Q96L58 329 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms