RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 CACNG4Q9UBN1 327 aa12.51□□□□□ -0.41
YBX3-216ENST00000544622 SEL1LQ9UBV2 794 aa12.51□□□□□ -0.41
YBX3-216ENST00000544622 ADAM28Q9UKQ2 775 aa12.51□□□□□ -0.41
YBX3-216ENST00000544622 BARX2Q9UMQ3 279 aaPredicted RBP12.51□□□□□ -0.41
YBX3-216ENST00000544622 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
YBX3-216ENST00000544622 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 K7ENM7 598 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 TBCAO75347 108 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 ADRB2P07550 413 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 CNPP09543 421 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 KCNE1P15382 129 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 IGFBP6P24592 240 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 STAT6P42226 847 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 DSG1Q02413 1049 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 SOX4Q06945 474 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 HSP90AA2PQ14568 343 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 BMS1Q14692 1282 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 NOLC1Q14978 699 aaKnown RBP eCLIP12.5□□□□□ -0.41
YBX3-216ENST00000544622 UPP1Q16831 310 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 RESP18Q5W5W9 173 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 CNNM4Q6P4Q7 775 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 EP400NLQ6ZTU2 488 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 PDILTQ8N807 584 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 SLC22A17Q8WUG5 538 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 SUSD6Q92537 303 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 KLHL5Q96PQ7 755 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 CD320Q9NPF0 282 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 CD207Q9UJ71 328 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 MYH11P35749 1972 aa12.5□□□□□ -0.41
YBX3-216ENST00000544622 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
YBX3-216ENST00000544622 A0A0B4J269 797 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.49□□□□□ -0.41
YBX3-216ENST00000544622 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 TMEM189-UBE2V1I3L0A0 370 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 TNFRSF10AO00220 468 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 KIF4AO95239 1232 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 C1RP00736 705 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 CLCNKBP51801 687 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 OSTNP61366 133 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 SFR1Q86XK3 245 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 IQUBQ8NA54 791 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 SNX27Q96L92 541 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 TRIM9Q9C026 710 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 PLEKHA5Q9HAU0 1116 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 MRPL17Q9NRX2 175 aaKnown RBP12.49□□□□□ -0.41
YBX3-216ENST00000544622 ANKFY1Q9P2R3 1169 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 PRKAG3Q9UGI9 489 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
YBX3-216ENST00000544622 TTC26A0AVF1 554 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
YBX3-216ENST00000544622 TEX28O15482 410 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 TADA2AO75478 443 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 PAPLNO95428 1278 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
YBX3-216ENST00000544622 GAP43P17677 238 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 ADSSP30520 456 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 GLUD2P49448 558 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 CLCN4P51793 760 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 YARSP54577 528 aaKnown RBP12.48□□□□□ -0.41
YBX3-216ENST00000544622 ZP2Q05996 745 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 EHHADHQ08426 723 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 KCNA1Q09470 495 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 CLUL1Q15846 466 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 USP41Q3LFD5 358 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 SEZ6Q53EL9 994 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 DCLRE1AQ6PJP8 1040 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
YBX3-216ENST00000544622 STAMQ92783 540 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 CASP10Q92851 521 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 HVCN1Q96D96 273 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 UROC1Q96N76 676 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 FNIP2Q9P278 1114 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 CPSF3Q9UKF6 684 aaKnown RBP12.48□□□□□ -0.41
YBX3-216ENST00000544622 TRIOO75962 3097 aa12.48□□□□□ -0.41
YBX3-216ENST00000544622 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
YBX3-216ENST00000544622 OGTO15294 1046 aa12.47□□□□□ -0.41
YBX3-216ENST00000544622 POLR2DO15514 142 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms