RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TOM1L1O75674 476 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
HCFC2-202ENST00000544223 CXCL8P10145 99 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 SNRPFP62306 86 aaKnown RBP14.76□□□□□ -0.05
HCFC2-202ENST00000544223 PSMD6Q15008 389 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 NAB2Q15742 525 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ATF7IP2Q5U623 682 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 LLGL2Q6P1M3 1020 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 RUFY4Q6ZNE9 571 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
HCFC2-202ENST00000544223 SLC30A5Q8TAD4 765 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 LMBR1Q8WVP7 490 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 TCP11Q8WWU5 503 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ANKRD7Q92527 254 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 UBXN4Q92575 508 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 KAT2BQ92831 832 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 THAP2Q9H0W7 228 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 TMEM134Q9H6X4 195 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 SAR1BQ9Y6B6 198 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 MAPK13O15264 365 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 GUCY2FP51841 1108 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 PTENP60484 403 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 HTRA3P83110 453 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TFAMQ00059 246 aaKnown RBP14.75□□□□□ -0.05
HCFC2-202ENST00000544223 DGKDQ16760 1214 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TRPV1Q8NER1 839 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TMC2Q8TDI7 906 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 SYT11Q9BT88 431 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 GNEQ9Y223 722 aaKnown RBP14.75□□□□□ -0.05
HCFC2-202ENST00000544223 GRID2IPA4D2P6 1211 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 H0YCG3 227 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 PJA2O43164 708 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TACC1O75410 805 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 CHRNB2P17787 502 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TNFAIP3P21580 790 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF394Q53GI3 561 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 AGPAT1Q99943 283 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TLR10Q9BXR5 811 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 TSGA10Q9BZW7 698 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 MYO1AQ9UBC5 1043 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 NUB1Q9Y5A7 615 aa14.75□□□□□ -0.05
HCFC2-202ENST00000544223 N4BP1O75113 896 aaKnown RBP14.74□□□□□ -0.05
HCFC2-202ENST00000544223 PHACTR2O75167 634 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 PIGRP01833 764 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 MYL3P08590 195 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 SLC26A2P50443 739 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 GPC3P51654 580 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 ZACNQ401N2 412 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 SCARA5Q6ZMJ2 495 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 C15orf39Q6ZRI6 1047 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 CPNE8Q86YQ8 564 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 EFCAB13Q8IY85 973 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 EPS8L1Q8TE68 723 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 NOX5Q96PH1 765 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 TLL2Q9Y6L7 1015 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 TRIP11Q15643 1979 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 PGK1P00558 417 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 CDR1P51861 262 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 EFNA5P52803 228 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 ORC1Q13415 861 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 IQSEC1Q6DN90 963 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 PASD1Q8IV76 773 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 EMID1Q96A84 441 aaPredicted RBP14.74□□□□□ -0.05
HCFC2-202ENST00000544223 CDT1Q9H211 546 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 FZD8Q9H461 694 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 HES2Q9Y543 173 aa14.74□□□□□ -0.05
HCFC2-202ENST00000544223 ACKR2O00590 384 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 KIF3CO14782 793 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 ZMYND10O75800 440 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 ARF4P18085 180 aaPredicted RBP14.73□□□□□ -0.05
HCFC2-202ENST00000544223 CD58P19256 250 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 PSMC4P43686 418 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 MYL6P60660 151 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 C2orf54Q08AI8 447 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 KIF22Q14807 665 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 AMHR2Q16671 573 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF484Q5JVG2 852 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 SLFN12LQ6IEE8 588 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF662Q6ZS27 426 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 SRGAP1Q7Z6B7 1085 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 FAM71AQ8IYT1 594 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 TRIM58Q8NG06 486 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 USP6NLQ92738 828 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 BTBD6Q96KE9 485 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 OSMRQ99650 979 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 ZFYVE28Q9HCC9 887 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 PTPRHQ9HD43 1115 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 NOCTQ9UK39 431 aaKnown RBP14.73□□□□□ -0.05
HCFC2-202ENST00000544223 NENFQ9UMX5 172 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 COG5Q9UP83 839 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 BZW2Q9Y6E2 419 aaKnown RBP14.73□□□□□ -0.05
HCFC2-202ENST00000544223 P4HA2O15460 535 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 TREHO43280 583 aa14.73□□□□□ -0.05
HCFC2-202ENST00000544223 SEC31AO94979 1220 aaKnown RBP14.73□□□□□ -0.05
HCFC2-202ENST00000544223 MFAP3P55082 362 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms