RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 MAP3K7O43318 606 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 SMTNL2Q2TAL5 461 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 MUM1L1Q5H9M0 696 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 ANKRD36BP1Q96IX9 119 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 TSC22D3Q99576 134 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 PDGFDQ9GZP0 370 aaPredicted RBP13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 STRCP1A6NGW2 1772 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
TUBGCP2-210ENST00000543663 PDXKO00764 312 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 SARSP49591 514 aaKnown RBP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 OVGP1Q12889 678 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 CAND2O75155 1236 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 HOXA7P31268 230 aaPredicted RBP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 HABP4Q5JVS0 413 aaKnown RBP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 JADE1Q6IE81 842 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 TRIM11Q96F44 468 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 GPRC5CQ9NQ84 441 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 APEX2Q9UBZ4 518 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAF1Q9UNN5 650 aaPredicted RBP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 HAUS5O94927 633 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 DPEP1P16444 411 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 SOX11P35716 441 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 CDR2Q01850 454 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 MAP7Q14244 749 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 MMGT1Q8N4V1 131 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 TSEN2Q8NCE0 465 aaKnown RBP13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM143Q96AN5 459 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 DNAJC7Q99615 494 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAM107AO95990 144 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 CDC25CP30307 473 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 P3H1Q32P28 736 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 DEPDC1BQ8WUY9 529 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 MED15Q96RN5 788 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 ERP44Q9BS26 406 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 SLC9A2Q9UBY0 812 aa13.73□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAM237AA0A1B0GTK4 181 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 USP11P51784 963 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 ARFIP2P53365 341 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 HMGCS2P54868 508 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 ARL4CP56559 192 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 PSMC1P62191 440 aaKnown RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 WDR93Q6P2C0 686 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 GLIS2Q9BZE0 524 aaPredicted RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 AHDC1Q5TGY3 1603 aaPredicted RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 CYP11B2P19099 503 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 ORC2Q13416 577 aaPredicted RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 PACS2Q86VP3 889 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 TRABDQ9H4I3 376 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 PSD3Q9NYI0 1048 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 EYA4O95677 639 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 YY1P25490 414 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 KCNA1Q09470 495 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 KDELC2Q7Z4H8 507 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
TUBGCP2-210ENST00000543663 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 EPHB6O15197 1021 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 NLRP7Q8WX94 980 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 H0YCG3 227 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 ASNSP08243 561 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 MTMR2Q13614 643 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 SNRNP48Q6IEG0 339 aaKnown RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 TRMT10CQ7L0Y3 403 aaKnown RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 CCNYL1Q8N7R7 359 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 RUSC1Q9BVN2 902 aa13.71□□□□□ -0.21
TUBGCP2-210ENST00000543663 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms