RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ANO5Q75V66 913 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 IRF2BP1Q8IU81 584 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
COPS7A-217ENST00000543537 TCP11Q8WWU5 503 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 BAG1Q99933 345 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-217ENST00000543537 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
COPS7A-217ENST00000543537 KIAA1586Q9HCI6 787 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-217ENST00000543537 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 PCDHB7Q9Y5E2 793 aa12.51□□□□□ -0.41
COPS7A-217ENST00000543537 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
COPS7A-217ENST00000543537 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 GRM6O15303 877 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
COPS7A-217ENST00000543537 MAFO75444 373 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-217ENST00000543537 PSMC2P35998 433 aaKnown RBP12.5□□□□□ -0.41
COPS7A-217ENST00000543537 KCNQ1P51787 676 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 ZBED6P86452 979 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 GTF2BQ00403 316 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CDK17Q00537 523 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CAMK1Q14012 370 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CTC1Q2NKJ3 1217 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CREBRFQ8IUR6 639 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CEP170P1Q96L14 293 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 VPS16Q9H269 839 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 MYO6Q9UM54 1294 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
COPS7A-217ENST00000543537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
COPS7A-217ENST00000543537 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 P4HA2O15460 535 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 ASAP2O43150 1006 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 HIP1RO75146 1068 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 IPO7O95373 1038 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 TRIM21P19474 475 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 NR2F2P24468 414 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 UBE3AQ05086 875 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 DRP2Q13474 957 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 CYP26C1Q6V0L0 522 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 TRMT1LQ7Z2T5 733 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 SPPL3Q8TCT6 385 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 DHX33Q9H6R0 707 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-217ENST00000543537 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
COPS7A-217ENST00000543537 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 A0A0U1RQF3 1178 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 HOXA2O43364 376 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 MFAP3LO75121 409 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 OFD1O75665 1012 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 NR3C1P04150 777 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 ITGB1P05556 798 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 RFX1P22670 979 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 FECHP22830 423 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 ANXA13P27216 316 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 EFNA5P52803 228 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 PMS1P54277 932 aaKnown RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 SLFN12LQ6IEE8 588 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 INTS8Q75QN2 995 aaKnown RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 TRIM59Q8IWR1 403 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 GCOM2Q9BZD3 368 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 TAB2Q9NYJ8 693 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 WRAP73Q9P2S5 460 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-217ENST00000543537 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
COPS7A-217ENST00000543537 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
COPS7A-217ENST00000543537 ATG2AQ2TAZ0 1938 aa12.47□□□□□ -0.41
COPS7A-217ENST00000543537 TMEM150BA6NC51 233 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms