RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 POLR3FQ9H1D9 316 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 STK38LQ9Y2H1 464 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 ARFGEF1Q9Y6D6 1849 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 THAP12O43422 761 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 ZBED4O75132 1171 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 MAP3K6O95382 1288 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 ECEL1O95672 775 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 GJB1P08034 283 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 RALAP11233 206 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 COILP38432 576 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 MMP14P50281 582 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 ZNF131P52739 623 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 RWDD2BP57060 319 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 SETQ01105 290 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 MTMR3Q13615 1198 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 GKAP1Q5VSY0 366 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 DUPD1Q68J44 220 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 KIF2BQ8N4N8 673 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 MKNK1Q9BUB5 465 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 MYOZ2Q9NPC6 264 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 C1orf112Q9NSG2 853 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 PHF2O75151 1096 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 PSMC5P62195 406 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 SMTNL2Q2TAL5 461 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 NAP1L3Q99457 506 aaPredicted RBP14.49□□□□□ -0.09
PTPN1-202ENST00000541713 RIT2Q99578 217 aa14.49□□□□□ -0.09
PTPN1-202ENST00000541713 SLX4Q8IY92 1834 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 GTPBP10A4D1E9 387 aaKnown RBP14.48□□□□□ -0.09
PTPN1-202ENST00000541713 WDR91A4D1P6 747 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 WDR64B1ANS9 1081 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 TNFRSF8P28908 595 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 NSFP46459 744 aaKnown RBP14.48□□□□□ -0.09
PTPN1-202ENST00000541713 MICALCLQ6ZW33 695 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 RASGEF1CQ8N431 466 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 TMEM161BQ8NDZ6 487 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 OSBPL7Q9BZF2 842 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 NXF1Q9UBU9 619 aaKnown RBP14.48□□□□□ -0.09
PTPN1-202ENST00000541713 KRT19P08727 400 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 KIF22Q14807 665 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 WDR44Q5JSH3 913 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 CYP4A22Q5TCH4 519 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 SLC39A4Q6P5W5 647 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 KCNV1Q6PIU1 500 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 TRIM50Q86XT4 487 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 FGFR1OP2Q9NVK5 253 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 GRHL1Q9NZI5 618 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 GINS2Q9Y248 185 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
PTPN1-202ENST00000541713 TTLL13PA6NNM8 815 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 RPSAP08865 295 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ZBTB48P10074 688 aaPredicted RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 PRKCEQ02156 737 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 HIBCHQ6NVY1 386 aaPredicted RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 XPO6Q96QU8 1125 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 PABPC3Q9H361 631 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 CDC42EP4Q9H3Q1 356 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ALG13Q9NP73 1137 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 SLC12A6Q9UHW9 1150 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 RPTORQ8N122 1335 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 CD19P15391 556 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ERFP50548 548 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ITGA8P53708 1063 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 HIRAP54198 1017 aaPredicted RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 NRLP54845 237 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ADCY2Q08462 1091 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 DRP2Q13474 957 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 BRDTQ58F21 947 aaPredicted RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 KCNT1Q5JUK3 1230 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ICE2Q659A1 982 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 NUGGCQ68CJ6 796 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 THNSL1Q8IYQ7 743 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 LRRC71Q8N4P6 559 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 MREGQ8N565 214 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 CCDC33Q8N5R6 958 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 DEFB129Q9H1M3 183 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 NOCTQ9UK39 431 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 PCDHA10Q9Y5I2 948 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 COL24A1Q17RW2 1714 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 IGBP1P78318 339 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 POU5F1Q01860 360 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 SLC15A2Q16348 729 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 MCTP2Q6DN12 878 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 STYK1Q6J9G0 422 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 GLIS1Q8NBF1 620 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 C7orf43Q8WVR3 580 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ZNF516Q92618 1163 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ARHGEF2Q92974 986 aaKnown RBP14.47□□□□□ -0.09
PTPN1-202ENST00000541713 ZDHHC18Q9NUE0 388 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 FBXO40Q9UH90 709 aa14.47□□□□□ -0.09
PTPN1-202ENST00000541713 PTPRJQ12913 1337 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TCP11X1B4DZS4 312 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 TRAPPC3O43617 180 aa14.46□□□□□ -0.09
PTPN1-202ENST00000541713 HLA-DRAP01903 254 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms