RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 INHAP05111 366 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 ASGR1P07306 291 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CST5P28325 142 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 OAS2P29728 719 aaKnown RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 WNT7BP56706 349 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 MAP2K1Q02750 393 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 KCNA10Q16322 511 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 SEZ6Q53EL9 994 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 KLHDC9Q8NEP7 349 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 LMO3Q8TAP4 145 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 SPAG5Q96R06 1193 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 GCOM2Q9BZD3 368 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 ADAMTS10Q9H324 1103 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 RBAK-RBAKDNI3L0D1 243 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 ZSCAN12O43309 604 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 FAM189A1O60320 539 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 GPR32O75388 356 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CDK17Q00537 523 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 EPC2Q52LR7 807 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 SFMBT2Q5VUG0 894 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CDR2LQ86X02 465 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 PCSK9Q8NBP7 692 aaKnown RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 SYN2Q92777 582 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 NHEJ1Q9H9Q4 299 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 PDE11AQ9HCR9 933 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 TRIM17Q9Y577 477 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 NDUFA10O95299 355 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 ARF4P18085 180 aaPredicted RBP9.39□□□□□ -0.91
THBS3-210ENST00000541576 TNNI1P19237 187 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 GRK4P32298 578 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CLDN10P78369 228 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 FAM47CQ5HY64 1035 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 TAF2Q6P1X5 1199 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 RNF180Q86T96 592 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 BRSK2Q8IWQ3 736 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 OSMRQ99650 979 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CDT1Q9H211 546 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 APEX2Q9UBZ4 518 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 GTF2IRD1Q9UHL9 959 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 TSPAN1O60635 241 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 ABL1P00519 1130 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CCDC175P0C221 793 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 IBSPP21815 317 aaPredicted RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 TNFSF9P41273 254 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CCSAPQ6IQ19 270 aaPredicted RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 THNSL1Q8IYQ7 743 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 NME8Q8N427 588 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CPB2Q96IY4 423 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 MYO6Q9UM54 1294 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CEP350Q5VT06 3117 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 RFX1P22670 979 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 ZSCAN26Q16670 478 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 LMBRD2Q68DH5 695 aaPredicted RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 PHLDB3Q6NSJ2 640 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 FBXL13Q8NEE6 735 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 RASSF4Q9H2L5 321 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 PDZD7Q9H5P4 517 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 HMX1Q9NP08 348 aaPredicted RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 ARGLU1Q9NWB6 273 aaPredicted RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 DNAJC12Q9UKB3 198 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
THBS3-210ENST00000541576 COQ4Q9Y3A0 265 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
THBS3-210ENST00000541576 ZNF263O14978 683 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 MCF2P10911 925 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 DARSP14868 501 aaKnown RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 FGFR4P22455 802 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CYLC1P35663 651 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 ARID5AQ03989 594 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.91
THBS3-210ENST00000541576 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CATSPER4Q7RTX7 472 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CCDC170Q8IYT3 715 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 TAS1R2Q8TE23 839 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CCDC42Q96M95 316 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 CGRRF1Q99675 332 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.37□□□□□ -0.91
THBS3-210ENST00000541576 RNF216Q9NWF9 866 aaPredicted RBP9.37□□□□□ -0.91
THBS3-210ENST00000541576 AIPL1Q9NZN9 384 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 TFR2Q9UP52 801 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 BRCA2P51587 3418 aa9.37□□□□□ -0.91
THBS3-210ENST00000541576 A0A1B0GUA9 196 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms