RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 LXNQ9BS40 222 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 USP18Q9UMW8 372 aa13.02□□□□□ -0.33
UBC-209ENST00000541272 MTF2Q9Y483 593 aaPredicted RBP13.02□□□□□ -0.33
UBC-209ENST00000541272 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 EML1O00423 815 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 FGFR3P22607 806 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 FAM171A1Q5VUB5 890 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 TPRG1Q6ZUI0 275 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
UBC-209ENST00000541272 NAP1L2Q9ULW6 460 aaPredicted RBP13.01□□□□□ -0.33
UBC-209ENST00000541272 LRRN2O75325 713 aa13□□□□□ -0.33
UBC-209ENST00000541272 PTPN2P17706 415 aa13□□□□□ -0.33
UBC-209ENST00000541272 XBP1P17861 261 aa13□□□□□ -0.33
UBC-209ENST00000541272 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
UBC-209ENST00000541272 XKR9Q5GH70 373 aa13□□□□□ -0.33
UBC-209ENST00000541272 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
UBC-209ENST00000541272 ITFG1Q8TB96 612 aa13□□□□□ -0.33
UBC-209ENST00000541272 LOXL4Q96JB6 756 aa13□□□□□ -0.33
UBC-209ENST00000541272 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
UBC-209ENST00000541272 SLKQ9H2G2 1235 aaPredicted RBP13□□□□□ -0.33
UBC-209ENST00000541272 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
UBC-209ENST00000541272 TRPV4Q9HBA0 871 aa13□□□□□ -0.33
UBC-209ENST00000541272 ZFP14Q9HCL3 533 aa13□□□□□ -0.33
UBC-209ENST00000541272 DNMT3BQ9UBC3 853 aaKnown RBP13□□□□□ -0.33
UBC-209ENST00000541272 MRPS23Q9Y3D9 190 aaKnown RBP13□□□□□ -0.33
UBC-209ENST00000541272 HES2Q9Y543 173 aa13□□□□□ -0.33
UBC-209ENST00000541272 ACACBO00763 2458 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 N4BP3O15049 544 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 SLITRK3O94933 977 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 RPS6KB1P23443 525 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 HSPA4P34932 840 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 MTAPQ13126 283 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 NPY5RQ15761 445 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 SLC8B1Q6J4K2 584 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 PRSS55Q6UWB4 352 aaPredicted RBP12.99□□□□□ -0.33
UBC-209ENST00000541272 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
UBC-209ENST00000541272 MAP4K3Q8IVH8 894 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
UBC-209ENST00000541272 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 GJA10Q969M2 543 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 HSD17B14Q9BPX1 270 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 TRMT61BQ9BVS5 477 aaKnown RBP12.99□□□□□ -0.33
UBC-209ENST00000541272 FZD8Q9H461 694 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 XPNPEP1Q9NQW7 623 aa12.99□□□□□ -0.33
UBC-209ENST00000541272 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
UBC-209ENST00000541272 TPRP12270 2363 aaKnown RBP12.98□□□□□ -0.33
UBC-209ENST00000541272 CCDC163A0A0D9SF12 145 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 SHISA7A6NL88 538 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 F8W810 466 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 CCL16O15467 120 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 SLC37A4O43826 429 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 ABLIM3O94929 683 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 RHOP08100 348 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 PSMC3P17980 439 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 RPL17P18621 184 aaKnown RBP12.98□□□□□ -0.33
UBC-209ENST00000541272 CXCL12P48061 93 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 CAPSQ13938 189 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 NAB2Q15742 525 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 CDCA2Q69YH5 1023 aaPredicted RBP12.98□□□□□ -0.33
UBC-209ENST00000541272 TCEAL8Q8IYN2 117 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 SYNPOQ8N3V7 929 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 MCPH1Q8NEM0 835 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 HAS1Q92839 578 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
UBC-209ENST00000541272 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 ADPGKQ9BRR6 497 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 PARD6AQ9NPB6 346 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 SEMA4GQ9NTN9 838 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 PARP2Q9UGN5 583 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 ANGPTL2Q9UKU9 493 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
UBC-209ENST00000541272 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.98□□□□□ -0.33
UBC-209ENST00000541272 CPLX1O14810 134 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 MARCH6O60337 910 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 KIF4AO95239 1232 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 ATF2P15336 505 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 GLRA2P23416 452 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 AKAP5P24588 427 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 OR1D2P34982 312 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 LRRC32Q14392 662 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
UBC-209ENST00000541272 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms