RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RHOT1Q8IXI2 618 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 SLC16A11Q8NCK7 471 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 CASKIN2Q8WXE0 1202 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 DCLRE1CQ96SD1 692 aaKnown RBP8.06□□□□□ -1.12
YBX3-210ENST00000540975 SMAD5Q99717 465 aaKnown RBP8.06□□□□□ -1.12
YBX3-210ENST00000540975 MANSC1Q9H8J5 431 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 GPRC5BQ9NZH0 403 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 LIMCH1Q9UPQ0 1083 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 ACTL7AQ9Y615 435 aa8.06□□□□□ -1.12
YBX3-210ENST00000540975 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 DRGXA6NNA5 263 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 ZNF202O95125 648 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 RAP2AP10114 183 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 NR4A1P22736 598 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 GDF5P43026 501 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 SLC16A1P53985 500 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 ANAPC15P60006 121 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 METRNLQ641Q3 311 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 OTUD7BQ6GQQ9 843 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 ZNF276Q8N554 614 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 ZGPATQ8N5A5 531 aaKnown RBP8.05□□□□□ -1.12
YBX3-210ENST00000540975 SLC25A43Q8WUT9 341 aaPredicted RBP8.05□□□□□ -1.12
YBX3-210ENST00000540975 COA7Q96BR5 231 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 FAM193BQ96PV7 902 aaPredicted RBP8.05□□□□□ -1.12
YBX3-210ENST00000540975 MMRN2Q9H8L6 949 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 IPPQ9Y573 584 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 PCDHA13Q9Y5I0 950 aa8.05□□□□□ -1.12
YBX3-210ENST00000540975 MYBBP1AQ9BQG0 1328 aaKnown RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 AKAP8O43823 692 aaKnown RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 EDNRBP24530 442 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 ALDH1A3P47895 512 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 ATP8B2P98198 1209 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 KIF23Q02241 960 aaPredicted RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 USP51Q70EK9 711 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 MYOCQ99972 504 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 SCAND2PQ9GZW5 306 aaPredicted RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 TRPM5Q9NZQ8 1165 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 FAM30AQ9NZY2 134 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 SLC23A1Q9UHI7 598 aa8.04□□□□□ -1.12
YBX3-210ENST00000540975 REXO2Q9Y3B8 237 aaKnown RBP8.04□□□□□ -1.12
YBX3-210ENST00000540975 HTRA2O43464 458 aaPredicted RBP8.03□□□□□ -1.12
YBX3-210ENST00000540975 GPR32O75388 356 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 RPS6KA4O75676 772 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 ATP5JP18859 108 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 DDCP20711 480 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
YBX3-210ENST00000540975 RAP2BP61225 183 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 IGBP1P78318 339 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 MTM1Q13496 603 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
YBX3-210ENST00000540975 ZNF483Q8TF39 744 aaPredicted RBP8.03□□□□□ -1.12
YBX3-210ENST00000540975 HDAC10Q969S8 669 aa8.03□□□□□ -1.12
YBX3-210ENST00000540975 CCDC154A6NI56 674 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 ZNF185O15231 689 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 POMCP01189 267 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 ZSCAN20P17040 1043 aaPredicted RBP8.02□□□□□ -1.13
YBX3-210ENST00000540975 MCM7P33993 719 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 CHN2P52757 468 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 UBXN2BQ14CS0 331 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 SEM1Q6ZVN7 128 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 GDF7Q7Z4P5 450 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 HAS1Q92839 578 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 SLC46A2Q9BY10 475 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 NRDE2Q9H7Z3 1164 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 CHST2Q9Y4C5 530 aa8.02□□□□□ -1.13
YBX3-210ENST00000540975 CYR61O00622 381 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 TEX33O43247 280 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 SNUPNO95149 360 aaKnown RBP8.01□□□□□ -1.13
YBX3-210ENST00000540975 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
YBX3-210ENST00000540975 MAKP20794 623 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 RECQLP46063 649 aaPredicted RBP8.01□□□□□ -1.13
YBX3-210ENST00000540975 ADKP55263 362 aaKnown RBP8.01□□□□□ -1.13
YBX3-210ENST00000540975 FAM189BP81408 668 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 ABHD18Q0P651 414 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 IL10RAQ13651 578 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 MED25Q71SY5 747 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 MIGA2Q7L4E1 593 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 ZFPM1Q8IX07 1006 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 CLIP3Q96DZ5 547 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 PHACTR3Q96KR7 559 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 TEX101Q9BY14 249 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 SERPINB13Q9UIV8 391 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 FZD1Q9UP38 647 aa8.01□□□□□ -1.13
YBX3-210ENST00000540975 ZRANB2O95218 330 aaKnown RBP eCLIP8□□□□□ -1.13
YBX3-210ENST00000540975 ZFP36P26651 326 aaKnown RBP8□□□□□ -1.13
YBX3-210ENST00000540975 PTGS2P35354 604 aa8□□□□□ -1.13
YBX3-210ENST00000540975 CDC42EP1Q00587 391 aa8□□□□□ -1.13
YBX3-210ENST00000540975 TARDBPQ13148 414 aaKnown RBP eCLIP8□□□□□ -1.13
YBX3-210ENST00000540975 C3orf36Q3SXR2 165 aa8□□□□□ -1.13
YBX3-210ENST00000540975 PDCD4Q53EL6 469 aaKnown RBP8□□□□□ -1.13
YBX3-210ENST00000540975 ZNF529Q6P280 563 aa8□□□□□ -1.13
YBX3-210ENST00000540975 MRGPREQ86SM8 312 aa8□□□□□ -1.13
YBX3-210ENST00000540975 DRC7Q8IY82 874 aa8□□□□□ -1.13
YBX3-210ENST00000540975 STAG1Q8WVM7 1258 aa8□□□□□ -1.13
YBX3-210ENST00000540975 LENG9Q96B70 501 aa8□□□□□ -1.13
YBX3-210ENST00000540975 NEU1Q99519 415 aa8□□□□□ -1.13
YBX3-210ENST00000540975 TDP1Q9NUW8 608 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms