RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 KIAA0391O15091 583 aaKnown RBP13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 ASAP2O43150 1006 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 CYBAP13498 195 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 TNNI1P19237 187 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 PSEN2P49810 448 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 ENPEPQ07075 957 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 IRF5Q13568 498 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 KIF22Q14807 665 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 MPZL3Q6UWV2 235 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 PPM1KQ8N3J5 372 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 TCHPQ9BT92 498 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 PDZD7Q9H5P4 517 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 TAS2R14Q9NYV8 317 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
AP003559.1-201ENST00000540906 OGTO15294 1046 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 BUB1O43683 1085 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 KRT86O43790 486 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 SGPL1O95470 568 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 PHKA2P46019 1235 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 ADAM17P78536 824 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 AMPD2Q01433 879 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 KIF5AQ12840 1032 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NOGQ13253 232 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 ZNF568Q3ZCX4 644 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NFRKBQ6P4R8 1299 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 GLYCTKQ8IVS8 523 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 EFCAB13Q8IY85 973 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 U2AF1L4Q8WU68 220 aaKnown RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 FNBP1Q96RU3 617 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NFKBIZQ9BYH8 718 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 ADAMTS10Q9H324 1103 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 TNFSF13BQ9Y275 285 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 MYH10P35580 1976 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 LDHAP00338 332 aaKnown RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 CHRNB2P17787 502 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 ARF4P18085 180 aaPredicted RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 USP8P40818 1118 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 FCGRTP55899 365 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 CETN1Q12798 172 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NOP9Q86U38 636 aaKnown RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 SHC3Q92529 594 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 NAPGQ99747 312 aaPredicted RBP13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 RNF186Q9NXI6 227 aa13.25□□□□□ -0.29
AP003559.1-201ENST00000540906 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 CYP26A1O43174 497 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 TREHO43280 583 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 TSPAN1O60635 241 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 GPR32O75388 356 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 CST3P01034 146 aaPredicted RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 RFX1P22670 979 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 POU5F1BQ06416 359 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 BIRC3Q13489 604 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 FAM71AQ8IYT1 594 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 PCDHB18PQ96TA0 734 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 MTMR12Q9C0I1 747 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 AP5M1Q9H0R1 490 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 CXCL16Q9H2A7 254 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 BZW2Q9Y6E2 419 aaKnown RBP13.24□□□□□ -0.29
AP003559.1-201ENST00000540906 CTAGE9A4FU28 777 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 PGK1P00558 417 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 CXCL8P10145 99 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 CYP2C9P11712 490 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 AKR1A1P14550 325 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 ELNP15502 786 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 TMOD1P28289 359 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 NCBP1Q09161 790 aaKnown RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 NAB2Q15742 525 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 SLC47A2Q86VL8 602 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 TSGA10Q9BZW7 698 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 NOCTQ9UK39 431 aaKnown RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 GINS2Q9Y248 185 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 RRN3P2A6NIE6 340 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 NCK2O43639 380 aa13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
AP003559.1-201ENST00000540906 BMS1Q14692 1282 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms