RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 TTC38Q5R3I4 469 aa17.91■□□□□ 0.46
TRIM65-203ENST00000540812 NT5DC1Q5TFE4 455 aa17.91■□□□□ 0.46
TRIM65-203ENST00000540812 C4orf32Q8N8J7 132 aa17.91■□□□□ 0.46
TRIM65-203ENST00000540812 DTWD2Q8NBA8 298 aa17.91■□□□□ 0.46
TRIM65-203ENST00000540812 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
TRIM65-203ENST00000540812 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.91■□□□□ 0.464e-6■■■□□ 18.6
TRIM65-203ENST00000540812 LIMCH1Q9UPQ0 1083 aa17.91■□□□□ 0.46
TRIM65-203ENST00000540812 GVINP1Q7Z2Y8 2422 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 ANHXE9PGG2 379 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
TRIM65-203ENST00000540812 SRFP11831 508 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 CCT6AP40227 531 aaKnown RBP17.9■□□□□ 0.46
TRIM65-203ENST00000540812 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
TRIM65-203ENST00000540812 GLRA4Q5JXX5 417 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 GRASPQ7Z6J2 395 aaPredicted RBP17.9■□□□□ 0.46
TRIM65-203ENST00000540812 FBXO18Q8NFZ0 1043 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 NXPE3Q969Y0 559 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 ADPGKQ9BRR6 497 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 RPP25Q9BUL9 199 aaKnown RBP17.9■□□□□ 0.46
TRIM65-203ENST00000540812 BHMT2Q9H2M3 363 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 NUMBLQ9Y6R0 609 aa17.9■□□□□ 0.46
TRIM65-203ENST00000540812 STK25O00506 426 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 CCL16O15467 120 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 C8AP07357 584 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 FSHRP23945 695 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRIM65-203ENST00000540812 PPP2R5AQ15172 486 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 ANGPT1Q15389 498 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 DCAF4L1Q3SXM0 396 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 HAUS3Q68CZ6 603 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 GPR152Q8TDT2 470 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 LLPHQ9BRT6 129 aaKnown RBP17.89■□□□□ 0.45
TRIM65-203ENST00000540812 TBC1D17Q9HA65 648 aa17.89■□□□□ 0.45
TRIM65-203ENST00000540812 VWA8A3KMH1 1905 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 MUTP22033 750 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 ELAVL2Q12926 359 aaKnown RBP17.88■□□□□ 0.45
TRIM65-203ENST00000540812 PPM1LQ5SGD2 360 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 ATF7IP2Q5U623 682 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 NKD2Q969F2 451 aaPredicted RBP17.88■□□□□ 0.45
TRIM65-203ENST00000540812 IFT74Q96LB3 600 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 PPP1R10Q96QC0 940 aaKnown RBP17.88■□□□□ 0.45
TRIM65-203ENST00000540812 KIAA1024Q9UPX6 916 aa17.88■□□□□ 0.45
TRIM65-203ENST00000540812 HNRNPA1P09651 372 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRIM65-203ENST00000540812 FGFR3P22607 806 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 TRAPPC10P48553 1259 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 RBM25P49756 843 aaKnown RBP17.87■□□□□ 0.45
TRIM65-203ENST00000540812 CLCNKBP51801 687 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 EFNA5P52803 228 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 PARM1Q6UWI2 310 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 RSPO2Q6UXX9 243 aaPredicted RBP17.87■□□□□ 0.45
TRIM65-203ENST00000540812 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.87■□□□□ 0.45
TRIM65-203ENST00000540812 C3orf58Q8NDZ4 430 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 ITFG1Q8TB96 612 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 KIFAP3Q92845 792 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 FGF14Q92915 247 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 GOLGA2P5Q9HBQ8 144 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 ARHGEF3Q9NR81 526 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 DDX19AQ9NUU7 478 aaKnown RBP17.87■□□□□ 0.45
TRIM65-203ENST00000540812 LRWD1Q9UFC0 647 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 DCHS1Q96JQ0 3298 aa17.87■□□□□ 0.45
TRIM65-203ENST00000540812 TMEM189-UBE2V1I3L0A0 370 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 I3L4J1 428 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 B3GAT3O94766 335 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 RFX1P22670 979 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 OR1D2P34982 312 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 TOB1P50616 345 aaPredicted RBP17.86■□□□□ 0.45
TRIM65-203ENST00000540812 GNL2Q13823 731 aaKnown RBP17.86■□□□□ 0.45
TRIM65-203ENST00000540812 RAB33AQ14088 237 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 AXDND1Q5T1B0 1012 aaPredicted RBP17.86■□□□□ 0.45
TRIM65-203ENST00000540812 PDXDC1Q6P996 788 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 DAW1Q8N136 415 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 CEP120Q8N960 986 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 SLC7A14Q8TBB6 771 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 SLC2A4RGQ9NR83 387 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 MTRRQ9UBK8 725 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 POLIQ9UNA4 740 aa17.86■□□□□ 0.45
TRIM65-203ENST00000540812 ZFP37Q9Y6Q3 630 aaPredicted RBP17.86■□□□□ 0.45
TRIM65-203ENST00000540812 EP300Q09472 2414 aaPredicted RBP17.86■□□□□ 0.45
TRIM65-203ENST00000540812 PP2D1A8MPX8 630 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 DCNP07585 359 aaKnown RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 TKTP29401 623 aaKnown RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 HOXA9P31269 272 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 BRCC3P46736 316 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 PEX3P56589 373 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 GPC5P78333 572 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 HMGN5P82970 282 aaKnown RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 SOX4Q06945 474 aaPredicted RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 UPP1Q16831 310 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 SPECC1Q5M775 1068 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 DCLRE1AQ6PJP8 1040 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 TAS1R3Q7RTX0 852 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 IGSF22Q8N9C0 903 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 FAM184AQ8NB25 1140 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 FGF13Q92913 245 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 ACO2Q99798 780 aaKnown RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 FOXQ1Q9C009 403 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms