RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 ITGA4P13612 1032 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 CUL1Q13616 776 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 PWP2Q15269 919 aaKnown RBP10.27□□□□□ -0.77
LCOR-209ENST00000540664 CLUL1Q15846 466 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 Q3C1V9 767 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 TAF3Q5VWG9 929 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
LCOR-209ENST00000540664 CDCA2Q69YH5 1023 aaPredicted RBP10.27□□□□□ -0.77
LCOR-209ENST00000540664 GPAT2Q6NUI2 795 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 ZPBP2Q6X784 338 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 ZNF677Q86XU0 584 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 WHAMMQ8TF30 809 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 ALG3Q92685 438 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 ZBTB45Q96K62 511 aaPredicted RBP10.27□□□□□ -0.77
LCOR-209ENST00000540664 GPR20Q99678 358 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 PAGR1Q9BTK6 254 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 AP1M1Q9BXS5 423 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 CCDC113Q9H0I3 377 aa10.27□□□□□ -0.77
LCOR-209ENST00000540664 TAF1DQ9H5J8 278 aaPredicted RBP10.27□□□□□ -0.77
LCOR-209ENST00000540664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.774e-6■■■■■ 106.6
LCOR-209ENST00000540664 ESYT3A0FGR9 886 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FAM189A1O60320 539 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FAM153BP0C7A2 387 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 UNGP13051 313 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 PEX5P50542 639 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 TRADDQ15628 312 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 CLEC16AQ2KHT3 1053 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FAM153CQ494X1 144 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 CELF3Q5SZQ8 465 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 ACAD10Q6JQN1 1059 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 PLPPR4Q7Z2D5 763 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 BBXQ8WY36 941 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 RNPC3Q96LT9 517 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 MPHOSPH6Q99547 160 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 CGRRF1Q99675 332 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 TARS2Q9BW92 718 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 DDX47Q9H0S4 455 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 C1orf112Q9NSG2 853 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 UVRAGQ9P2Y5 699 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FAM153AQ9UHL3 310 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 GLTPD2A6NH11 291 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 GAS2O43903 313 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 MSCO60682 206 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FGGP02679 453 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 ACOT2P49753 483 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 EFNA5P52803 228 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 PTENP60484 403 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 GRM1Q13255 1194 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 DRP2Q13474 957 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 PPP2R5EQ16537 467 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 EAPPQ56P03 285 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 ZBTB41Q5SVQ8 909 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 IER5Q5VY09 327 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 CCDC62Q6P9F0 684 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FASTKD5Q7L8L6 764 aaKnown RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FAM84AQ96KN4 292 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 FNBP1Q96RU3 617 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 ZSWIM1Q9BR11 485 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 MSTO1Q9BUK6 570 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 RBAKQ9NYW8 714 aaPredicted RBP10.26□□□□□ -0.77
LCOR-209ENST00000540664 CNTN6Q9UQ52 1028 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 TRPC6Q9Y210 931 aa10.26□□□□□ -0.77
LCOR-209ENST00000540664 PGK2P07205 417 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 TNNI1P19237 187 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 OSBPP22059 807 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 CTNNA2P26232 953 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 HSPA9P38646 679 aaKnown RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 MAATS1Q7Z4T9 603 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 EXOC8Q8IYI6 725 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 ATP8B4Q8TF62 1192 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 IFT81Q8WYA0 676 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 RIN2Q8WYP3 895 aaPredicted RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 ELMO3Q96BJ8 720 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 OPTNQ96CV9 577 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 MROH8Q9H579 483 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 FAM204AQ9H8W3 233 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 APOBEC3GQ9HC16 384 aaKnown RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 NR2E1Q9Y466 385 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 PCDHB2Q9Y5E7 798 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 ABLIM1O14639 778 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 PHACTR2O75167 634 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 CYP1A1P04798 512 aaPredicted RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 COMTP21964 271 aa10.25□□□□□ -0.77
LCOR-209ENST00000540664 CTNNA1P35221 906 aaKnown RBP10.25□□□□□ -0.77
LCOR-209ENST00000540664 BPIFB4P59827 614 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms