RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 GLRA4Q5JXX5 417 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 HYIQ5T013 277 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 GPR149Q86SP6 731 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 DAW1Q8N136 415 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 KCTD17Q8N5Z5 321 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 ACAP3Q96P50 834 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 PAAF1Q9BRP4 392 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 CCDC94Q9BW85 323 aaPredicted RBP9.89□□□□□ -0.83
LMO3-222ENST00000540445 TARS2Q9BW92 718 aaKnown RBP9.89□□□□□ -0.83
LMO3-222ENST00000540445 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 ZHX3Q9H4I2 956 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 PIDD1Q9HB75 910 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.89□□□□□ -0.83
LMO3-222ENST00000540445 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 MYH15Q9Y2K3 1946 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 NOTCH4Q99466 2003 aa9.89□□□□□ -0.83
LMO3-222ENST00000540445 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 B3GAT3O94766 335 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 PAPLNO95428 1278 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 HARSP12081 509 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 PLS3P13797 630 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 RPL17P18621 184 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 CREMQ03060 361 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 CUL4AQ13619 759 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 PRSS55Q6UWB4 352 aaPredicted RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 ZDHHC14Q8IZN3 488 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 TDRD5Q8NAT2 981 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 ACSF2Q96CM8 615 aaPredicted RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 NTPCRQ9BSD7 190 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 TTPALQ9BTX7 342 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 RXFP1Q9HBX9 757 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 TOPORSQ9NS56 1045 aaPredicted RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 FNIP2Q9P278 1114 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 LARSQ9P2J5 1176 aaKnown RBP9.88□□□□□ -0.83
LMO3-222ENST00000540445 ARHGAP28Q9P2N2 729 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 TCHHQ07283 1943 aa9.88□□□□□ -0.83
LMO3-222ENST00000540445 SMIM28A0A1B0GU29 152 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 H0YCG3 227 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 SLC26A4O43511 780 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 TGM5O43548 720 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 TRAPPC3O43617 180 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 RFPL2O75678 378 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 KIF4AO95239 1232 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 LONP1P36776 959 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 GRM5P41594 1212 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CLCNKBP51801 687 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 NHLH1Q02575 133 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CEBPZQ03701 1054 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 MAPK7Q13164 816 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 MCM6Q14566 821 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 KARSQ15046 597 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 ARSHQ5FYA8 562 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 DCLRE1AQ6PJP8 1040 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 MPZL3Q6UWV2 235 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 C15orf39Q6ZRI6 1047 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CCDC149Q6ZUS6 474 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 OTOP3Q7RTS5 596 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 TAS1R3Q7RTX0 852 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 GPBP1Q86WP2 473 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 GPR65Q8IYL9 337 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 FBXL6Q8N531 539 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 MYCT1Q8N699 235 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CEP120Q8N960 986 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 KREMEN2Q8NCW0 462 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 PRSS33Q8NF86 280 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CMASQ8NFW8 434 aaPredicted RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 SPIRE2Q8WWL2 714 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 SMG7Q92540 1137 aaKnown RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 BICD1Q96G01 975 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 ZBTB45Q96K62 511 aaPredicted RBP9.87□□□□□ -0.83
LMO3-222ENST00000540445 CDT1Q9H211 546 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 PLEKHA4Q9H4M7 779 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 SLC38A7Q9NVC3 462 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 ANKFY1Q9P2R3 1169 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CLIC4Q9Y696 253 aa9.87□□□□□ -0.83
LMO3-222ENST00000540445 CLDN3O15551 220 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 FAM13AO94988 1023 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 BRD1O95696 1058 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 C1RP00736 705 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 ASGR2P07307 311 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 MCF2P10911 925 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 PLCG1P19174 1290 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 SYT1P21579 422 aa9.86□□□□□ -0.83
LMO3-222ENST00000540445 MARCKSP29966 332 aaPredicted RBP9.86□□□□□ -0.83
LMO3-222ENST00000540445 GBP2P32456 591 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms