RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PHKA2P46019 1235 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 WHAMMP3Q1A5X7 153 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 MARCH8Q5T0T0 291 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 MPZL3Q6UWV2 235 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 TSHZ1Q6ZSZ6 1077 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 H2AFVQ71UI9 128 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 FAM71AQ8IYT1 594 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 CEP112Q8N8E3 955 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 OR5B17Q8NGF7 314 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 SHC3Q92529 594 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 DHX38Q92620 1227 aaKnown RBP24.22■■□□□ 1.47
HOMER3-204ENST00000539827 FAM212AQ96EL1 285 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 JRKLQ9Y4A0 524 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 CYP26A1O43174 497 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 TMOD1P28289 359 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 TEX35Q5T0J7 233 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 PAXIP1Q6ZW49 1069 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-204ENST00000539827 TLK2Q86UE8 772 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 PTPRHQ9HD43 1115 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 SETD4Q9NVD3 440 aa24.21■■□□□ 1.47
HOMER3-204ENST00000539827 NCK2O43639 380 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 PROZP22891 400 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 ZNF568Q3ZCX4 644 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 THNSL1Q8IYQ7 743 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 ACP6Q9NPH0 428 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 A6NJR5 290 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 PALMO75781 387 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 GALCP54803 685 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 OSTNP61366 133 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 WDR44Q5JSH3 913 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 SPOPLQ6IQ16 392 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 PALB2Q86YC2 1186 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 RPUSD2Q8IZ73 545 aaKnown RBP24.2■■□□□ 1.46
HOMER3-204ENST00000539827 APBA2Q99767 749 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 NFKBIZQ9BYH8 718 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 C1orf112Q9NSG2 853 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 PRMT7Q9NVM4 692 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-204ENST00000539827 TAS2R14Q9NYV8 317 aa24.2■■□□□ 1.46
HOMER3-204ENST00000539827 CPSF3Q9UKF6 684 aaKnown RBP24.2■■□□□ 1.46
HOMER3-204ENST00000539827 BTNL10A8MVZ5 291 aa24.19■■□□□ 1.46
HOMER3-204ENST00000539827 ZC3H11AO75152 810 aaKnown RBP eCLIP24.19■■□□□ 1.46
HOMER3-204ENST00000539827 TAF3Q5VWG9 929 aa24.19■■□□□ 1.46
HOMER3-204ENST00000539827 SCARA3Q6AZY7 606 aa24.19■■□□□ 1.46
HOMER3-204ENST00000539827 RSRC2Q7L4I2 434 aaKnown RBP24.19■■□□□ 1.46
HOMER3-204ENST00000539827 CAPZA3Q96KX2 299 aa24.19■■□□□ 1.46
HOMER3-204ENST00000539827 PHACTR2O75167 634 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 NOP2P46087 812 aaKnown RBP24.18■■□□□ 1.46
HOMER3-204ENST00000539827 TM4SF4P48230 202 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 POU5F1BQ06416 359 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 NOP9Q86U38 636 aaKnown RBP24.18■■□□□ 1.46
HOMER3-204ENST00000539827 SLC47A2Q86VL8 602 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 CEP120Q8N960 986 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 NLRP7Q8WX94 980 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 SOCS4Q8WXH5 440 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 GOLGA1Q92805 767 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 EPC1Q9H2F5 836 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 PDCL3Q9H2J4 239 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 GPBP1L1Q9HC44 474 aaPredicted RBP24.18■■□□□ 1.46
HOMER3-204ENST00000539827 TNFSF13BQ9Y275 285 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 ZSWIM8A7E2V4 1837 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 KAT6AQ92794 2004 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 ZNF185O15231 689 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 KAT2BQ92831 832 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 SCLT1Q96NL6 688 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 CDT1Q9H211 546 aa24.18■■□□□ 1.46
HOMER3-204ENST00000539827 CHRNB2P17787 502 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 IRF5Q13568 498 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 AMHR2Q16671 573 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 IFNLR1Q8IU57 520 aaPredicted RBP24.17■■□□□ 1.46
HOMER3-204ENST00000539827 KIAA0319LQ8IZA0 1049 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 CPB2Q96IY4 423 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 ARID3AQ99856 593 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 INTUQ9ULD6 942 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 SNX12Q9UMY4 172 aa24.17■■□□□ 1.46
HOMER3-204ENST00000539827 GRID2IPA4D2P6 1211 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 CA12O43570 354 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 CLSTN1O94985 981 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 FTCDO95954 541 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 MYL3P08590 195 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 SMIM10L2AP0DMW4 78 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 SMIM10L2BP0DMW5 78 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 KRT5P13647 590 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 BEX3Q00994 111 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 GCNT1Q02742 428 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 FAM187BQ17R55 369 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 CYP4F22Q6NT55 531 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 EPS8L1Q8TE68 723 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 LMBR1Q8WVP7 490 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 APOBEC3GQ9HC16 384 aaKnown RBP24.16■■□□□ 1.46
HOMER3-204ENST00000539827 NOCTQ9UK39 431 aaKnown RBP24.16■■□□□ 1.46
HOMER3-204ENST00000539827 ATP8B3O60423 1300 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 RRN3P2A6NIE6 340 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 TMEM88BA6NKF7 163 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 GPR25O00155 361 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 ZEB2O60315 1214 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 CALCAP01258 141 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 ABCB4P21439 1286 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 NFRKBQ6P4R8 1299 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 WDR49Q8IV35 697 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 TMEM192Q8IY95 271 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms