RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 CCDC187A0A096LP49 1063 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 TBKBP1A7MCY6 615 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 B5MCH6 92 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 PRR23D1E9PI22 279 aaPredicted RBP2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 FAM153BP0C7A2 387 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 PRR23D2P0DMB1 279 aaPredicted RBP2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 KCNA6P17658 529 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 FOXG1P55316 489 aaPredicted RBP2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 EPHA7Q15375 998 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 BMT2Q1RMZ1 405 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 AGAP9Q5VTM2 703 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 KIAA1841Q6NSI8 718 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 TAS1R1Q7RTX1 841 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 MCF2L2Q86YR7 1114 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 RPL36ALQ969Q0 106 aaKnown RBP2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 SARAFQ96BY9 339 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 CDC5LQ99459 802 aaKnown RBP2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 KLHL11Q9NVR0 708 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 USP18Q9UMW8 372 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 HECW1Q76N89 1606 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 ABCA9Q8IUA7 1624 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 MAP3K4Q9Y6R4 1608 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 ATP10BO94823 1461 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 FYCO1Q9BQS8 1478 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 CASKIN1Q8WXD9 1431 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 TCRBV16S1A1N1A0A5B0 115 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 DRGXA6NNA5 263 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 H7C1D1 291 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 M0R2C6 588 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 CYP17A1P05093 508 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 SNHG28P0DPA3 235 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 TUBA4AP68366 448 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 ARHGAP44Q17R89 818 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 MTERF2Q49AM1 385 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 AWAT2Q6E213 333 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 NME9Q86XW9 330 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 PHYKPLQ8IUZ5 450 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 RHOT2Q8IXI1 618 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 GSTCDQ8NEC7 633 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 ZFP28Q8NHY6 868 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 PPP1R14CQ8TAE6 165 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 MDM1Q8TC05 714 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 RTF1Q92541 710 aaKnown RBP2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 ZNF428Q96B54 188 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 ZNF669Q96BR6 464 aaPredicted RBP2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 PTCD3Q96EY7 689 aaKnown RBP2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 GALNT9Q9HCQ5 603 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 KCTD5Q9NXV2 234 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 DMTF1Q9Y222 760 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 TBC1D30Q9Y2I9 924 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 PCDHB6Q9Y5E3 794 aa2.78□□□□□ -1.96
CBX3P4-201ENST00000538909 EPRSP07814 1512 aaKnown RBP2.78□□□□□ -1.97
CBX3P4-201ENST00000538909 ARAP3Q8WWN8 1544 aa2.78□□□□□ -1.97
CBX3P4-201ENST00000538909 ABCC10Q5T3U5 1492 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 CLIP1P30622 1438 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 FMN1Q68DA7 1419 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 VPS8Q8N3P4 1428 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 CCDC85CA6NKD9 419 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 PRAMEF4O60810 478 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 SLC9A1P19634 815 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 KELP23276 732 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 POLGP54098 1239 aaPredicted RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 CXADRP78310 365 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 SSBP2P81877 361 aaPredicted RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 ARID5AQ03989 594 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 MGAT5Q09328 741 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 GRM1Q13255 1194 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 GNL2Q13823 731 aaKnown RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 ZNF174Q15697 407 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 TMEM119Q4V9L6 283 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 SLC9A4Q6AI14 798 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 FCRLBQ6BAA4 426 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 ESRP1Q6NXG1 681 aaKnown RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 FGD2Q7Z6J4 655 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 ZBTB8BQ8NAP8 495 aaPredicted RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 SMRP1Q8NCR6 262 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 CEP95Q96GE4 821 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 FDXACB1Q9BRP7 624 aaPredicted RBP2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 BHMT2Q9H2M3 363 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 WWOXQ9NZC7 414 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 TIAM1Q13009 1591 aa2.77□□□□□ -1.97
CBX3P4-201ENST00000538909 PTPRGP23470 1445 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CDC42BPAQ5VT25 1732 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 CDC42BPBQ9Y5S2 1711 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 AATKQ6ZMQ8 1374 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 KIF14Q15058 1648 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 MYPNQ86TC9 1320 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 TTC37Q6PGP7 1564 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 A0A1B0GTW7 788 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 PTPDC1A2A3K4 754 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 PEX1O43933 1283 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 NPTXRO95502 500 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 MECP2P51608 486 aaKnown RBP2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 ADCY1Q08828 1119 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 RAPGEF1Q13905 1077 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 RAB33AQ14088 237 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 LLGL1Q15334 1064 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 UBE3CQ15386 1083 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 ZNF260Q3ZCT1 412 aa2.76□□□□□ -1.97
CBX3P4-201ENST00000538909 ATXN7L2Q5T6C5 722 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms