RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BIN1O00499 593 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 CLIC2O15247 247 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 OGTO15294 1046 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 CLDN3O15551 220 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 CSPG5O95196 566 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 EFEMP2O95967 443 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 SKIP12755 728 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 BMPR1AP36894 532 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 GPR153Q6NV75 609 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 ELOA2Q8IYF1 753 aaPredicted RBP14.29□□□□□ -0.12
CHFR-216ENST00000538235 SLC39A11Q8N1S5 342 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 KLHL23Q8NBE8 558 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 PGBD4Q96DM1 585 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 MED15Q96RN5 788 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 CDX2Q99626 313 aaPredicted RBP14.29□□□□□ -0.12
CHFR-216ENST00000538235 ADPGKQ9BRR6 497 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 MSTO1Q9BUK6 570 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 ALG13Q9NP73 1137 aaKnown RBP14.29□□□□□ -0.12
CHFR-216ENST00000538235 CNTN3Q9P232 1028 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 TRIM49BA6NDI0 452 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 LACTBL1A8MY62 500 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 PPEF2O14830 753 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 HOXA2O43364 376 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHFR-216ENST00000538235 GALTP07902 379 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 NFICP08651 508 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 MCM4P33991 863 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 IRS1P35568 1242 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 PRCPP42785 496 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 BCAR1P56945 870 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 ALCAMQ13740 583 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 MORC3Q14149 939 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 CBWD2Q8IUF1 395 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
CHFR-216ENST00000538235 AGO2Q9UKV8 859 aaKnown RBP14.28□□□□□ -0.12
CHFR-216ENST00000538235 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 CASP4P49662 377 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 NCBP1Q09161 790 aaKnown RBP14.27□□□□□ -0.13
CHFR-216ENST00000538235 GRIK3Q13003 919 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 ZBTB6Q15916 424 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 KNOP1Q1ED39 458 aaKnown RBP14.27□□□□□ -0.13
CHFR-216ENST00000538235 KANK3Q6NY19 840 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 FBXO22Q8NEZ5 403 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 SPPL3Q8TCT6 385 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 POMGNT1Q8WZA1 660 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 SMARCE1Q969G3 411 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 HSPBP1Q9NZL4 362 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.13
CHFR-216ENST00000538235 PPP1R3GB7ZBB8 358 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 H3BNC9 293 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 NRP1O14786 923 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 KIF4AO95239 1232 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 CLTAP09496 248 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 KCNE1P15382 129 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 GARTP22102 1010 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 SCP2P22307 547 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHFR-216ENST00000538235 PSMD2Q13200 908 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 GUF1Q8N442 669 aaKnown RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 HASPINQ8TF76 798 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 ACAP3Q96P50 834 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 FAM213AQ9BRX8 229 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 TMEM206Q9H813 350 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
CHFR-216ENST00000538235 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
CHFR-216ENST00000538235 FGF18O76093 207 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 LAG3P18627 525 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 CYP2J2P51589 502 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 ERVFC1P60507 584 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 GPM6BQ13491 265 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 LMBRD2Q68DH5 695 aaPredicted RBP14.25□□□□□ -0.13
CHFR-216ENST00000538235 JADE1Q6IE81 842 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 RBM43Q6ZSC3 357 aaKnown RBP14.25□□□□□ -0.13
CHFR-216ENST00000538235 TAS1R1Q7RTX1 841 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 ADGRD2Q7Z7M1 963 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 C12orf56Q8IXR9 622 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 URGCPQ8TCY9 931 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CHFR-216ENST00000538235 B3GALT6Q96L58 329 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms