RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 BAG2O95816 211 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 LMNAP02545 664 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 ITGA7Q13683 1181 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 ZNF496Q96IT1 587 aaPredicted RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 SENP7Q9BQF6 1050 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 TMEM109Q9BVC6 243 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 LIN28AQ9H9Z2 209 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 CUEDC1Q9NWM3 386 aaPredicted RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 RASAL2Q9UJF2 1139 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 CYP2D7A0A087X1C5 515 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ATP5HO75947 161 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 BMP15O95972 392 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ANPEPP15144 967 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 MSLNQ13421 630 aaPredicted RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 CHRNA2Q15822 529 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 ASIC2Q16515 512 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ZNF568Q3ZCX4 644 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 KLC3Q6P597 504 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 FBXL19Q6PCT2 694 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 RNF111Q6ZNA4 994 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SLFN11Q7Z7L1 901 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 NELFCDQ8IXH7 590 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SRBD1Q8N5C6 995 aaKnown RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SMC6Q96SB8 1091 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 SYNCQ9H7C4 482 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 PCDH12Q9NPG4 1184 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 BTBD7Q9P203 1132 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 LTN1O94822 1766 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SNAP23O00161 211 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 NMT2O60551 498 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ALDH2P05091 517 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SMIM18P0DKX4 95 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SLC9A1P19634 815 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ABCB4P21439 1286 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 MAP3K10Q02779 954 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 CCDC80Q76M96 950 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ST13P4Q8IZP2 240 aaPredicted RBP11.36□□□□□ -0.59
RTN3-208ENST00000537981 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 KRT35Q92764 455 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 STMN2Q93045 179 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 TAS2R1Q9NYW7 299 aa11.36□□□□□ -0.59
RTN3-208ENST00000537981 ATP9BO43861 1147 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ADAM23O75077 832 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ZBED4O75132 1171 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 NUBP1P53384 320 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 HIRAP54198 1017 aaPredicted RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 NCOA4Q13772 614 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 SEC23AQ15436 765 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MAP7D1Q3KQU3 841 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MDH1BQ5I0G3 518 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 OTOAQ7RTW8 1153 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 USP6NLQ92738 828 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 PTCD3Q96EY7 689 aaKnown RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 BTBD10Q9BSF8 475 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 GANQ9H2C0 597 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ARMC7Q9H6L4 198 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 ARMCX1Q9P291 453 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 WDR91A4D1P6 747 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 MYMKA6NI61 221 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 EIF3FO00303 357 aaPredicted RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 GYG2O15488 501 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 BUD23O43709 281 aaKnown RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 SERPINB7O75635 380 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 PDGFRBP09619 1106 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 RARGP13631 454 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 XBP1P17861 261 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 STT3AP46977 705 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 AQP4P55087 323 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 HDAC4P56524 1084 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 GK3PQ14409 553 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 TRIP13Q15645 432 aaPredicted RBP11.35□□□□□ -0.59
RTN3-208ENST00000537981 SH2D4BQ5SQS7 431 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 GRAMD4Q6IC98 578 aa11.35□□□□□ -0.59
RTN3-208ENST00000537981 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms