RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 METTL13Q8N6R0 699 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 RBBP8NLQ8NC74 664 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 MAP4K1Q92918 833 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 HEY2Q9UBP5 337 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 HESX1Q9UBX0 185 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 KDM5BQ9UGL1 1544 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 DNMBPQ6XZF7 1577 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 ARHGEF37A1IGU5 675 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 CBFA2T3O75081 653 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 RGS20O76081 388 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 STAT4Q14765 748 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 CLEC4FQ8N1N0 589 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 PPHLN1Q8NEY8 458 aaKnown RBP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 C6orf62Q9GZU0 229 aaPredicted RBP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 APPL1Q9UKG1 709 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 ITSN1Q15811 1721 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 FREM3P0C091 2139 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 MYO1GB0I1T2 1018 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 HSMCR30P0CW71 290 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 TCN1P20061 433 aaPredicted RBP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 GPC5P78333 572 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 NSUN2Q08J23 767 aaKnown RBP eCLIP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 ACAP1Q15027 740 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 C1orf228Q6PIY5 440 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 WNT8AQ9H1J5 351 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 CNOT8Q9UFF9 292 aaKnown RBP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 PHF8Q9UPP1 1060 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 C1orf232A0A0U1RR37 186 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 FAM25AB3EWG3 89 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 FAM25CB3EWG5 89 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 FAM25GB3EWG6 89 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 LAD1O00515 517 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 MYL1P05976 194 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 ACCSQ96QU6 501 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 ATP8A2Q9NTI2 1148 aa5.96□□□□□ -1.45
CSMD1-215ENST00000537824 HBS1LQ9Y450 684 aaKnown RBP5.96□□□□□ -1.45
CSMD1-215ENST00000537824 GOLGA8CPA6NN73 597 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RECQLP46063 649 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 POU5F1BQ06416 359 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 CDYLQ9Y232 598 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 E2F8A0AVK6 867 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PLA2G4BP0C869 781 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MMGT1Q8N4V1 131 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 EPS8L3Q8TE67 593 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 SNX19Q92543 992 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 DPF2Q92785 391 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 CACNA2D2Q9NY47 1150 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 IFT140Q96RY7 1462 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PER1O15534 1290 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PPIP5K2O43314 1243 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 WASHC2DQ5SRD0 308 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL17Q6TDP4 642 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 BNIPLQ7Z465 357 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 STX19Q8N4C7 294 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RMND5BQ96G75 393 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 HDHD2Q9H0R4 259 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 METTL5Q9NRN9 209 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PRELID1Q9Y255 219 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MYOM2P54296 1465 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 MYO3BQ8WXR4 1341 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 KCNA2P16389 499 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 AKIRIN2Q53H80 203 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TGFBRAP1Q8WUH2 860 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PPP2R3CQ969Q6 453 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TMEM247A6NEH6 219 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 BTN3A3O00478 584 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 SASH3O75995 380 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 COPAP53621 1224 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 STK4Q13043 487 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 NDUFA5Q16718 116 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM69Q86WT6 500 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 REXO1L1PQ8IX06 675 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 LPIN2Q92539 896 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RBM41Q96IZ5 413 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PSMC3IPQ9P2W1 217 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 NIP7Q9Y221 180 aaKnown RBP eCLIP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 REREQ9P2R6 1566 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PRR14LQ5THK1 2151 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM24O15164 1050 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TNFRSF21O75509 655 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 NR3C1P04150 777 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PSMA4P25789 261 aaKnown RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TRIQKQ629K1 86 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 RAD9BQ6WBX8 426 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 UTS2BQ765I0 119 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 COL23A1Q86Y22 540 aaPredicted RBP5.96□□□□□ -1.46
CSMD1-215ENST00000537824 AK8Q96MA6 479 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TMEM79Q9BSE2 394 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 OSBPL3Q9H4L5 887 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 CD209Q9NNX6 404 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 PLCH2O75038 1416 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 TNKSO95271 1327 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 CCDC130P13994 396 aa5.96□□□□□ -1.46
CSMD1-215ENST00000537824 SGSM1Q2NKQ1 1148 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms