RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 LIN7AO14910 233 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 GAS7O60861 476 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 TTC4O95801 387 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CCNB1P14635 433 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SNAP25P60880 206 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 STRN3Q13033 797 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SGO2Q562F6 1265 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 PPP1R21Q6ZMI0 780 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 RTKN2Q8IZC4 609 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 BBOF1Q8ND07 529 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CYP2W1Q8TAV3 490 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 FAM151AQ8WW52 585 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 RAB3IPQ96QF0 476 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ACCSQ96QU6 501 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 K7ENM7 598 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 HIP1RO75146 1068 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 ATP5HO75947 161 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 SGPL1O95470 568 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
CPSF7-218ENST00000537641 MSH2P43246 934 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 KCNJ1P48048 391 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 MXI1P50539 228 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 STAT2P52630 851 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 ATP11AP98196 1134 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 FMO1Q01740 532 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 PPP3CAQ08209 521 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 RASA3Q14644 834 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 LRRC14Q15048 493 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-218ENST00000537641 BANK1Q8NDB2 785 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 MGARPQ8TDB4 240 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 SHC3Q92529 594 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 GMLQ99445 158 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 TRIM6Q9C030 488 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-218ENST00000537641 NKIRAS1Q9NYS0 192 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
CPSF7-218ENST00000537641 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 TP73O15350 636 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 CHMP2AO43633 222 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 ACSL3O95573 720 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 GAS8O95995 478 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 KRT16P08779 473 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 VIL1P09327 827 aaKnown RBP12.97□□□□□ -0.33
CPSF7-218ENST00000537641 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
CPSF7-218ENST00000537641 BRAFP15056 766 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 HOXA13P31271 388 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-218ENST00000537641 STX2P32856 288 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 CHKAP35790 457 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 CCNG1P51959 295 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 MFAP3P55082 362 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 CENPCQ03188 943 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 MTFR1Q15390 333 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 C1orf220Q5T0J3 134 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 B3GNT9Q6UX72 402 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
CPSF7-218ENST00000537641 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 TEKT3Q9BXF9 490 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 FOXP3Q9BZS1 431 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 TXLNGQ9NUQ3 528 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 KLHL14Q9P2G3 628 aa12.97□□□□□ -0.33
CPSF7-218ENST00000537641 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-218ENST00000537641 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-218ENST00000537641 THAP12O43422 761 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 CDH16O75309 829 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 ABHD2P08910 425 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 ATF2P15336 505 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 DLG4P78352 724 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 CDR2Q01850 454 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 STAT4Q14765 748 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 PARP6Q2NL67 630 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 FKBP1CQ5VVH2 108 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 OTUD6AQ7L8S5 288 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 DAW1Q8N136 415 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 CCDC77Q9BR77 488 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 UNC45AQ9H3U1 944 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 NINJ2Q9NZG7 142 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 LARSQ9P2J5 1176 aaKnown RBP12.96□□□□□ -0.33
CPSF7-218ENST00000537641 ZBTB21Q9ULJ3 1066 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
CPSF7-218ENST00000537641 CLDN3O15551 220 aa12.96□□□□□ -0.34
CPSF7-218ENST00000537641 LUC7L3O95232 432 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms