RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 NFASCO94856 1347 aa10.74□□□□□ -0.69
CPSF7-217ENST00000537162 TRABD2BA6NFA1 517 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 PIK3CDO00329 1044 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 KRT10P13645 584 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 LMAN2Q12907 356 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 TRIP6Q15654 476 aaKnown RBP10.73□□□□□ -0.69
CPSF7-217ENST00000537162 UBE2SQ16763 222 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 UBXN11Q5T124 520 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 FAM160B1Q5W0V3 765 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 MFSD6LQ8IWD5 586 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 CKAP2LQ8IYA6 745 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 LNX1Q8TBB1 728 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-217ENST00000537162 SMARCD2Q92925 531 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 PGBD4Q96DM1 585 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 ZFYVE19Q96K21 471 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 SDF4Q9BRK5 362 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 C8orf33Q9H7E9 229 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-217ENST00000537162 GTSE1Q9NYZ3 720 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 KANSL3Q9P2N6 904 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 PCDH15Q96QU1 1955 aa10.73□□□□□ -0.69
CPSF7-217ENST00000537162 DOPEY1Q5JWR5 2465 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 A0A087WZ62 844 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 HEPACAM2A8MVW5 462 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 MAFGO15525 162 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 SH3BP5O60239 455 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 MOSPD3O75425 235 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 GJA1P17302 382 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 DHPSP49366 369 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 RAB27AP51159 221 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 SCNN1GP51170 649 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 GRM4Q14833 912 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 GPR65Q8IYL9 337 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 SYNPOQ8N3V7 929 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 CAMKK1Q8N5S9 505 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 DEPDC1BQ8WUY9 529 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 CUL5Q93034 780 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 MSANTD3Q96H12 275 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 MXRA8Q9BRK3 442 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 FDXACB1Q9BRP7 624 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 APOL6Q9BWW8 343 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 FZD8Q9H461 694 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 AVENQ9NQS1 362 aaPredicted RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
CPSF7-217ENST00000537162 KIAA1549LQ6ZVL6 1849 aa10.72□□□□□ -0.69
CPSF7-217ENST00000537162 COL6A6A6NMZ7 2263 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 B8ZZF3 427 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 MAGEB2O15479 319 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 PTPRDP23468 1912 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 MLH1P40692 756 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 EIF2S3P41091 472 aaKnown RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 CREMQ03060 361 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 CAMK2BQ13554 666 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 PSMD5Q16401 504 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 FSTL4Q6MZW2 842 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 TOGARAM2Q6ZUX3 1019 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 DAGLBQ8NCG7 672 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 SMG8Q8ND04 991 aaKnown RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 ZSCAN18Q8TBC5 510 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 PANK1Q8TE04 598 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 LRRC3BQ96PB8 259 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 GAD1Q99259 594 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 PAAF1Q9BRP4 392 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 COLEC11Q9BWP8 271 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 GTPBP2Q9BX10 602 aaKnown RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 GCOM2Q9BZD3 368 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-217ENST00000537162 TPSD1Q9BZJ3 242 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 LY9Q9HBG7 655 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 DOPEY2Q9Y3R5 2298 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 MYO16Q9Y6X6 1858 aa10.71□□□□□ -0.69
CPSF7-217ENST00000537162 PI4KAP42356 2102 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 HELZP42694 1942 aaKnown RBP10.7□□□□□ -0.7
CPSF7-217ENST00000537162 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
CPSF7-217ENST00000537162 CNTNAP2Q9UHC6 1331 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 NBPF19A0A087WUL8 3843 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 HMMRO75330 724 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 PTPN2P17706 415 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 TMOD1P28289 359 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 TNK2Q07912 1038 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 TRAF1Q13077 416 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 PDXDC1Q6P996 788 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 ARMCX6Q7L4S7 300 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-217ENST00000537162 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
CPSF7-217ENST00000537162 HDDC3Q8N4P3 179 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms