RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 NCALDP61601 193 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 KLRC3Q07444 240 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 MAPK7Q13164 816 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CNGA2Q16280 664 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 SLC35G1Q2M3R5 365 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 C11orf91Q3C1V1 193 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ASPRV1Q53RT3 343 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 HERC4Q5GLZ8 1057 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CAPRIN2Q6IMN6 1127 aaKnown RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 TRMT10CQ7L0Y3 403 aaKnown RBP8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CYFIP1Q7L576 1253 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 GPBP1Q86WP2 473 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 JAMLQ86YT9 394 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 RHOT2Q8IXI1 618 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 UBL4BQ8N7F7 174 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CFAP61Q8NHU2 1237 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 WDR66Q8TBY9 1149 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 MDM1Q8TC05 714 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ZNF384Q8TF68 577 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 LPAR1Q92633 364 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 KLHL29Q96CT2 875 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 SAAL1Q96ER3 474 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 UIMC1Q96RL1 719 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 KCTD10Q9H3F6 313 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 RIOX1Q9H6W3 641 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ECT2Q9H8V3 914 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 TXNRD2Q9NNW7 524 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 MTUS1Q9ULD2 1270 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ARL2BPQ9Y2Y0 163 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 LOC285556D6RIA3 1793 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 ATRNL1Q5VV63 1379 aa8.34□□□□□ -1.07
CPSF7-216ENST00000536548 SPTBN4Q9H254 2564 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TLDC2A0PJX2 215 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 FRMD3A2A2Y4 597 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 POTEMA6NI47 508 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 DCDC2CA8MYV0 355 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PI4K2BG5E9Z4 385 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 RASGRF2O14827 1237 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 BACH1O14867 736 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 KIAA0391O15091 583 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 DDX3YO15523 660 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TLL1O43897 1013 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TDP2O95551 362 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 RARGP13631 454 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 RFX1P22670 979 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PON1P27169 355 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 ALDH5A1P51649 535 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 GALCP54803 685 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 JAM2P57087 298 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TLE2Q04725 743 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 CCDC15Q0P6D6 951 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 BNIP1Q12981 228 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SNX17Q15036 470 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TCEAL1Q15170 157 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 EPHA7Q15375 998 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SKIV2LQ15477 1246 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 Q3C1V9 767 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 GALNTL6Q49A17 601 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 FAM133BQ5BKY9 247 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 CMPK2Q5EBM0 449 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SEL1L2Q5TEA6 688 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 C11orf63Q6NUN7 778 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 BZW1Q7L1Q6 419 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 NELFCDQ8IXH7 590 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 ERMNQ8TAM6 284 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 FBF1Q8TES7 1133 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 AGAP11Q8TF27 550 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SCFD1Q8WVM8 642 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SOCS4Q8WXH5 440 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 FBXL18Q96ME1 805 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 SERPINB12Q96P63 405 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PIGSQ96S52 555 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PRMT1Q99873 361 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PORCNQ9H237 461 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TSPYL2Q9H2G4 693 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 TXLNGQ9NUQ3 528 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 USP40Q9NVE5 1235 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 MORF4L1Q9UBU8 362 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PCYOX1Q9UHG3 505 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 DDX25Q9UHL0 483 aaKnown RBP8.33□□□□□ -1.08
CPSF7-216ENST00000536548 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 MYH1P12882 1939 aa8.33□□□□□ -1.08
CPSF7-216ENST00000536548 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PRRC2BQ5JSZ5 2229 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 DDX3XO00571 662 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■■■■□ 20.9
CPSF7-216ENST00000536548 SLC37A4O43826 429 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 DIAPH2O60879 1101 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 HIP1RO75146 1068 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 UBOX5O94941 541 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 1430.6 ms