RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 VN1R3Q9BXE9 311 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PCDHGC5Q9Y5F6 944 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SMIM28A0A1B0GU29 152 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 NRP1O14786 923 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RHOBTB3O94955 611 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 IRS1P35568 1242 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PPM1AP35813 382 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ACOT2P49753 483 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 UBE2HP62256 183 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PLCB3Q01970 1234 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SOX4Q06945 474 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ENOX2Q16206 610 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 BMT2Q1RMZ1 405 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CRELD2Q6UXH1 353 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RABGGTAQ92696 567 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CBWD1Q9BRT8 395 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TOPORSQ9NS56 1045 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SPG21Q9NZD8 308 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EFEMP2O95967 443 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 THP07101 528 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ADRB2P07550 413 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CLTAP09496 248 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KCNE1P15382 129 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 OR1G1P47890 313 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 YARSP54577 528 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 WNT7BP56706 349 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ERVFC1P60507 584 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TUSC3Q13454 348 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SLFN12LQ6IEE8 588 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MAFAQ8NHW3 353 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 POMGNT1Q8WZA1 660 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 C18orf25Q96B23 403 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SAAL1Q96ER3 474 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 LMAN2LQ9H0V9 348 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TMEM206Q9H813 350 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 LMCD1Q9NZU5 365 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 AGO2Q9UKV8 859 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 COL6A3P12111 3177 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 UBE4BO95155 1302 aa12.34□□□□□ -0.43
TNFRSF1A-208ENST00000536194 LACTBL1A8MY62 500 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FSCN2O14926 492 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ALDH2P05091 517 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GARTP22102 1010 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 UBE3AQ05086 875 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SPAG1Q07617 926 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PSMD2Q13200 908 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KCNB1Q14721 858 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KNOP1Q1ED39 458 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PCIF1Q9H4Z3 704 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PLEKHA5Q9HAU0 1116 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TLR9Q9NR96 1032 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LMBRD1Q9NUN5 540 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GOLGA8IPA6NC78 632 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 GOLGA8JA6NMD2 632 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KIF4AO95239 1232 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 KYAT1Q16773 422 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 PTPROQ16827 1216 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TCEAL5Q5H9L2 206 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 TAS1R1Q7RTX1 841 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 DDX53Q86TM3 631 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 ELOA2Q8IYF1 753 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 SMYD4Q8IYR2 804 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-208ENST00000536194 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms