RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF211Q13398 564 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 NEDD9Q14511 834 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 ERO1BQ86YB8 467 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 KCNN1Q92952 543 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TARS2Q9BW92 718 aaKnown RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
VPS33B-202ENST00000535906 TSPYL1Q9H0U9 437 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 CARD9Q9H257 536 aa14.37□□□□□ -0.11
VPS33B-202ENST00000535906 ARIH2O95376 493 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 PIGRP01833 764 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 C4BPAP04003 597 aaKnown RBP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 TGFB3P10600 412 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 SKOR1P84550 965 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 Q3C1V9 767 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 ZACNQ401N2 412 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 TDRD10Q5VZ19 366 aaKnown RBP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 NAA35Q5VZE5 725 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 C11orf63Q6NUN7 778 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 CD302Q8IX05 232 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 NRBP2Q9NSY0 501 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 BHMG1C9JSJ3 638 aaPredicted RBP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 KRT14P02533 472 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 KRT5P13647 590 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 ECHS1P30084 290 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 CUL1Q13616 776 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 CAPSQ13938 189 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 MESDQ14696 234 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS33B-202ENST00000535906 SEPT1Q8WYJ6 367 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 KRT35Q92764 455 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 FGD4Q96M96 766 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 SIP14410 1827 aa14.36□□□□□ -0.11
VPS33B-202ENST00000535906 TTLL13PA6NNM8 815 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 A6NNZ2 444 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 SOCS7O14512 581 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
VPS33B-202ENST00000535906 HLA-DRAP01903 254 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
VPS33B-202ENST00000535906 RFC5P40937 340 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 MARCKSL1P49006 195 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 TUBB8Q3ZCM7 444 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 ANKRD13AQ8IZ07 590 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 BTBD6Q96KE9 485 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 CELF4Q9BZC1 486 aaKnown RBP14.35□□□□□ -0.11
VPS33B-202ENST00000535906 C1orf112Q9NSG2 853 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 RBPJLQ9UBG7 517 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 LRRC37A2A6NM11 1700 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 A0A0B4J269 797 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 SPDYE5A6NIY4 337 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 CXCL11O14625 94 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 TTI1O43156 1089 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 MTA2O94776 668 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 VNN1O95497 513 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 CYP1A2P05177 515 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 COMTP21964 271 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 HSDL1Q3SXM5 330 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 SEZ6Q53EL9 994 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 FAM160B1Q5W0V3 765 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 SLFN12LQ6IEE8 588 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 ENOSF1Q7L5Y1 443 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 CPNE8Q86YQ8 564 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 MSTO1Q9BUK6 570 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 NUP85Q9BW27 656 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 RBAKQ9NYW8 714 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-202ENST00000535906 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-202ENST00000535906 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
VPS33B-202ENST00000535906 GRIN2DO15399 1336 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ADGRA2Q96PE1 1338 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 EIF3HO15372 352 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 MAFO75444 373 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 MARK3P27448 753 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 COPB2P35606 906 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 POU5F1Q01860 360 aaKnown RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 C1orf131Q8NDD1 294 aaKnown RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 CDCA5Q96FF9 252 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 SLITRK6Q9H5Y7 841 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 TMEM134Q9H6X4 195 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ERVK-5Q9HDB9 667 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 MIF4GDA9UHW6 222 aaKnown RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ADCY3O60266 1144 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 SCP2P22307 547 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms