RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 KCND2Q9NZV8 630 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 ARHGAP28Q9P2N2 729 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 SMC3Q9UQE7 1217 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 TNFSF13BQ9Y275 285 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 PRG3Q9Y2Y8 225 aaPredicted RBP11.89□□□□□ -0.51
CCDC60-202ENST00000535685 HCN4Q9Y3Q4 1203 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
CCDC60-202ENST00000535685 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
CCDC60-202ENST00000535685 E9PMD0 336 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 K7ERI5 159 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 SNPHO15079 494 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 BMP15O95972 392 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 EDN1P05305 212 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 ADH1AP07327 375 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 EPCAMP16422 314 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 NPTX2P47972 431 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 GLUD2P49448 558 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 ZXDAP98168 799 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 MAPK7Q13164 816 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 NAB2Q15742 525 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 ATAT1Q5SQI0 421 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
CCDC60-202ENST00000535685 C15orf39Q6ZRI6 1047 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 TAS1R1Q7RTX1 841 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 GPR149Q86SP6 731 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-202ENST00000535685 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
CCDC60-202ENST00000535685 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 RPGRIP1Q96KN7 1286 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 AK8Q96MA6 479 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 APOL6Q9BWW8 343 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 POMKQ9H5K3 350 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 PTPRHQ9HD43 1115 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 PARP2Q9UGN5 583 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 ADAM28Q9UKQ2 775 aa11.88□□□□□ -0.51
CCDC60-202ENST00000535685 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 PTGESO14684 152 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 HIP1RO75146 1068 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 RECQL4O94761 1208 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 BRD1O95696 1058 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 THP07101 528 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 PROZP22891 400 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 KLRC2P26717 231 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 CDC25AP30304 524 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 PLA2G5P39877 138 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 CREMQ03060 361 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 DMP1Q13316 513 aaPredicted RBP11.87□□□□□ -0.51
CCDC60-202ENST00000535685 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 XKR4Q5GH76 650 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 ATF7IP2Q5U623 682 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 FUT10Q6P4F1 479 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 ELMSAN1Q6PJG2 1045 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 TRIM67Q6ZTA4 783 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 CABP7Q86V35 215 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 ACO2Q99798 780 aaKnown RBP11.87□□□□□ -0.51
CCDC60-202ENST00000535685 RUSC1Q9BVN2 902 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 GPR62Q9BZJ7 368 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 ZMYND15Q9H091 742 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 SNTG2Q9NY99 539 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 KLK14Q9P0G3 267 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 RAPGEFL1Q9UHV5 662 aa11.87□□□□□ -0.51
CCDC60-202ENST00000535685 PPP1R3GB7ZBB8 358 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 TEX28O15482 410 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 SCP2P22307 547 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 CA8P35219 290 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 GRM5P41594 1212 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 SLC12A3P55017 1021 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 PEX3P56589 373 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 SIGLEC14Q08ET2 396 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 RARS2Q5T160 578 aaKnown RBP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 LILRA6Q6PI73 481 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 PPP1R10Q96QC0 940 aaKnown RBP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 KIFC3Q9BVG8 833 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 APOL5Q9BWW9 433 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 MRPL4Q9BYD3 311 aaKnown RBP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 PLEKHA4Q9H4M7 779 aa11.86□□□□□ -0.51
CCDC60-202ENST00000535685 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC60-202ENST00000535685 VWA3AA6NCI4 1184 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 F8W810 466 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 ABLIM1O14639 778 aa11.85□□□□□ -0.51
CCDC60-202ENST00000535685 TADA2AO75478 443 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms