RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 ACACBO00763 2458 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 TBC1D4O60343 1298 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 MED24O75448 989 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 NPTXRO95502 500 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 DCAF4L1Q3SXM0 396 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 DCLRE1AQ6PJP8 1040 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 C4orf32Q8N8J7 132 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 KIFAP3Q92845 792 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 TBC1D17Q9HA65 648 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 C17orf75Q9HAS0 396 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 GDE1Q9NZC3 331 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 VWA8A3KMH1 1905 aa12.38□□□□□ -0.43
CLSTN3-206ENST00000535668 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 POTEMA6NI47 508 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 XYLBO75191 536 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 RECQL4O94761 1208 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ABLIM3O94929 683 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 KIF4AO95239 1232 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 LMNAP02545 664 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 FSHRP23945 695 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 PSMD5Q16401 504 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 UPP1Q16831 310 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 C1orf210Q8IVY1 113 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ADSSL1Q8N142 457 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 IGSF22Q8N9C0 903 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 PJA1Q8NG27 643 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 GPR152Q8TDT2 470 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 FGF13Q92913 245 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 B3GALT6Q96L58 329 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 NELL2Q99435 816 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 ADPGKQ9BRR6 497 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 FBXO4Q9UKT5 387 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
CLSTN3-206ENST00000535668 LRRIQ4A6NIV6 560 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ECI2O75521 394 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 LARGE1O95461 756 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 C8AP07357 584 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 CFHP08603 1231 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 PROZP22891 400 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 RPS9P46781 194 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 MLLT6P55198 1093 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 PFKPQ01813 784 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ST3GAL1Q11201 340 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 MRPL58Q14197 206 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 FAM171A1Q5VUB5 890 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ZC3H14Q6PJT7 736 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 APBB1IPQ7Z5R6 666 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 MAML2Q8IZL2 1156 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ZNF461Q8TAF7 563 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 FGF14Q92915 247 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
CLSTN3-206ENST00000535668 KANSL1LA0AUZ9 987 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 ABLIM1O14639 778 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SYN3O14994 580 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 EDN1P05305 212 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 PRKCBP05771 671 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 GLULP15104 373 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 KCNE1P15382 129 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 RPL17P18621 184 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 GRM5P41594 1212 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 TRIM29Q14134 588 aa12.35□□□□□ -0.43
CLSTN3-206ENST00000535668 AXDND1Q5T1B0 1012 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms