RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 SLF1Q9BQI6 1058 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 SH2D4AQ9H788 454 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 CAPN11Q9UMQ6 739 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 LUC7L2Q9Y383 392 aaKnown RBP13□□□□□ -0.33
LINC01089-204ENST00000535643 SAR1BQ9Y6B6 198 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 MYH1P12882 1939 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 A0A1W2PQJ5 194 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 RBM47A0AV96 593 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 FAM170BA6NMN3 283 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 HRO43593 1189 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 TDO2P48775 406 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 DNM2P50570 870 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 NRLP54845 237 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 APBA1Q02410 837 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 FUT2Q10981 343 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 NR5A1Q13285 461 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 NNTQ13423 1086 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 ICE2Q659A1 982 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 MMGT1Q8N4V1 131 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 SPIRE2Q8WWL2 714 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 CRACR2AQ9BSW2 395 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
LINC01089-204ENST00000535643 CUEDC2Q9H467 287 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 FAM204AQ9H8W3 233 aa12.99□□□□□ -0.33
LINC01089-204ENST00000535643 A0A087X0B3 334 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 FAM221BA6H8Z2 402 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
LINC01089-204ENST00000535643 GOLGA8KD6RF30 607 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 FGF18O76093 207 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 FGRP09769 529 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 EPB41P11171 864 aaKnown RBP12.98□□□□□ -0.33
LINC01089-204ENST00000535643 CALML3P27482 149 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 ICA1Q05084 483 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
LINC01089-204ENST00000535643 HIC1Q14526 733 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 COBLL1Q53SF7 1204 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 TMEM179Q6ZVK1 233 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 LSM14AQ8ND56 463 aaKnown RBP12.98□□□□□ -0.33
LINC01089-204ENST00000535643 FAM76AQ8TAV0 307 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 MORC4Q8TE76 937 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 NELFBQ8WX92 580 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 KLHL5Q96PQ7 755 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 OSBPL6Q9BZF3 934 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 ZSWIM4Q9H7M6 989 aa12.98□□□□□ -0.33
LINC01089-204ENST00000535643 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 ABCB11O95342 1321 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 OPA1O60313 960 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
LINC01089-204ENST00000535643 SYF2O95926 243 aaKnown RBP12.97□□□□□ -0.33
LINC01089-204ENST00000535643 CTSHP09668 335 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 USP8P40818 1118 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 AFMP43652 599 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 PPARAQ07869 468 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 HSP90AA4PQ58FG1 418 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 NOA1Q8NC60 698 aaKnown RBP12.97□□□□□ -0.33
LINC01089-204ENST00000535643 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
LINC01089-204ENST00000535643 CCDC86Q9H6F5 360 aaKnown RBP12.97□□□□□ -0.33
LINC01089-204ENST00000535643 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 SLC2A4RGQ9NR83 387 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 LCMT1Q9UIC8 334 aa12.97□□□□□ -0.33
LINC01089-204ENST00000535643 TTC3P53804 2025 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 POLQO75417 2590 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 BICDL2A1A5D9 508 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 LAD1O00515 517 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 ENPP3O14638 875 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.337e-8■■□□□ 12.5
LINC01089-204ENST00000535643 LILRB3O75022 631 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.33
LINC01089-204ENST00000535643 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
LINC01089-204ENST00000535643 STX17P56962 302 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 ZBED6P86452 979 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 UBXN1Q04323 297 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 MTAPQ13126 283 aa12.96□□□□□ -0.33
LINC01089-204ENST00000535643 ALS2CLQ60I27 953 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms