RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ZBED6P86452 979 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 GOLGA8FQ08AF8 430 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 GOLGA8DPQ0D2H9 430 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 PAK2Q13177 524 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 BFSP2Q13515 415 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 TSR1Q2NL82 804 aaKnown RBP24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 TWF2Q6IBS0 349 aaKnown RBP24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 SV2AQ7L0J3 742 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 CCDC112Q8NEF3 446 aa24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 ZNF830Q96NB3 372 aaPredicted RBP24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 EIF2AQ9BY44 585 aaKnown RBP24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 INTS2Q9H0H0 1204 aaKnown RBP24.81■■□□□ 1.56
RBFOX1-206ENST00000535565 GHRP10912 638 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 MNX1P50219 401 aaPredicted RBP24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 EPC2Q52LR7 807 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 SLC39A5Q6ZMH5 540 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 TMEM192Q8IY95 271 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 EHBP1Q8NDI1 1231 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 FBXL13Q8NEE6 735 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 DAAM1Q9Y4D1 1078 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 DNAH12Q6ZR08 3092 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 BRCA2P51587 3418 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 EPHB6O15197 1021 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 NOL4O94818 638 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 CD4P01730 458 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 ACTN1P12814 892 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 KLHDC7AQ5VTJ3 777 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 LMBRD2Q68DH5 695 aaPredicted RBP24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 TMEM106CQ9BVX2 250 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 GANQ9H2C0 597 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 KCNF1Q9H3M0 494 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 ASB7Q9H672 318 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 ABHD10Q9NUJ1 306 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 COQ4Q9Y3A0 265 aa24.8■■□□□ 1.56
RBFOX1-206ENST00000535565 PQBP1O60828 265 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 ZSCAN20P17040 1043 aaPredicted RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 ATN1P54259 1190 aaPredicted RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 YARSP54577 528 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 POLR2FP61218 127 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 LRMPQ12912 555 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 BIRC3Q13489 604 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 LPIN1Q14693 890 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 ZACNQ401N2 412 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 C15orf39Q6ZRI6 1047 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 CD302Q8IX05 232 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 OR8K1Q8NGG5 319 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 ZNF516Q92618 1163 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 AGO3Q9H9G7 860 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 ERVK-5Q9HDB9 667 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 FBXL5Q9UKA1 691 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 PADI3Q9ULW8 664 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 PTPRJQ12913 1337 aa24.79■■□□□ 1.56
RBFOX1-206ENST00000535565 RNF225M0QZC1 329 aaPredicted RBP24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 C4BPAP04003 597 aaKnown RBP24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 RFX1P22670 979 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 CD52P31358 61 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 DUOXA2Q1HG44 320 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 ANKRD33Q7Z3H0 272 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 NUCKS1Q9H1E3 243 aaKnown RBP24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 SIX2Q9NPC8 291 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 PRDM10Q9NQV6 1147 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 RAB20Q9NX57 234 aa24.78■■□□□ 1.56
RBFOX1-206ENST00000535565 LACTBL1A8MY62 500 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 DCDC2CA8MYV0 355 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 PHACTR2O75167 634 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 TMEM191BP0C7N4 346 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 COL6A1P12109 1028 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 UCHL3P15374 230 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 UBXN11Q5T124 520 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 C1orf53Q5VUE5 145 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 TDRD10Q5VZ19 366 aaKnown RBP24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 LRRC8DQ7L1W4 858 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 LMO3Q8TAP4 145 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 ANKRD36BP1Q96IX9 119 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 DNAJC7Q99615 494 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 NAA15Q9BXJ9 866 aaKnown RBP24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 PLEKHA5Q9HAU0 1116 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 NLRC4Q9NPP4 1024 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 ZNHIT6Q9NWK9 470 aaKnown RBP24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 SNTG2Q9NY99 539 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 APEX2Q9UBZ4 518 aa24.77■■□□□ 1.56
RBFOX1-206ENST00000535565 TNNC2P02585 160 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 SELPP16109 830 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 PIK3CAP42336 1068 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 TFAMQ00059 246 aaKnown RBP24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 APBA1Q02410 837 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 SLC10A6Q3KNW5 377 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 DPY19L2P1Q6NXN4 242 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 RRAGAQ7L523 313 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 HACE1Q8IYU2 909 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 TAS1R2Q8TE23 839 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 BAG1Q99933 345 aaPredicted RBP24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 NXF3Q9H4D5 531 aaKnown RBP24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 TRIP11Q15643 1979 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 PITPNM1O00562 1244 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 SKILP12757 684 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 CCZ1BP86790 482 aa24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 CCZ1P86791 482 aaPredicted RBP24.76■■□□□ 1.55
RBFOX1-206ENST00000535565 NT5DC4Q86YG4 428 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms