RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 TMEM199Q8N511 208 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 VWCEQ96DN2 955 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 XPO4Q9C0E2 1151 aaKnown RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 SAMSN1Q9NSI8 373 aaKnown RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■□□□□ 9
SCARB1-204ENST00000535005 ZNF623O75123 536 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 AKAP3O75969 853 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 GRM5P41594 1212 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 MATR3P43243 847 aaKnown RBP eCLIP13.34□□□□□ -0.278e-7■■□□□ 13.5
SCARB1-204ENST00000535005 CASP4P49662 377 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 ENPEPQ07075 957 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 CRELD2Q6UXH1 353 aaPredicted RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 FAM114A1Q8IWE2 563 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 FRMD4BQ9Y2L6 1034 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 EVI5O60447 810 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 MGEA5O60502 916 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 NPTXRO95502 500 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 PFKMP08237 780 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 CLTAP09496 248 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 EEF1GP26641 437 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 RAB27AP51159 221 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 FAM189BP81408 668 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 TWF2Q6IBS0 349 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 FRMD5Q7Z6J6 570 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 RTN4RL1Q86UN2 441 aaPredicted RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 MFSD14AQ96MC6 490 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 ADAM2Q99965 735 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 EIF2AQ9BY44 585 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 METTL14Q9HCE5 456 aaKnown RBP13.34□□□□□ -0.27
SCARB1-204ENST00000535005 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
SCARB1-204ENST00000535005 MKI67P46013 3256 aaKnown RBP13.33□□□□□ -0.28
SCARB1-204ENST00000535005 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 EPB41P11171 864 aaKnown RBP13.33□□□□□ -0.28
SCARB1-204ENST00000535005 SKIP12755 728 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
SCARB1-204ENST00000535005 SPAG1Q07617 926 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 TUBB2AQ13885 445 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 SNRNP35Q16560 246 aaKnown RBP13.33□□□□□ -0.28
SCARB1-204ENST00000535005 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 ZSWIM2Q8NEG5 633 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 EEF2KMTQ96G04 330 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 FAM213AQ9BRX8 229 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 FAM105AQ9NUU6 356 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
SCARB1-204ENST00000535005 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 C9IYK1 514 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ENPP3O14638 875 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ADRB2P07550 413 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 STAG3L1P0CL83 205 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 CSF2RAP15509 400 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ACOT2P49753 483 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 SLC24A5Q71RS6 500 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 CEP120Q8N960 986 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 SMG8Q8ND04 991 aaKnown RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 EXOC4Q96A65 974 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 CNOT6LQ96LI5 555 aaKnown RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 FANCCQ00597 558 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.287e-9■□□□□ 11
SCARB1-204ENST00000535005 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 INTS8Q75QN2 995 aaKnown RBP13.32□□□□□ -0.28
SCARB1-204ENST00000535005 DEFB128Q7Z7B8 93 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 BRSK2Q8IWQ3 736 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TRIM59Q8IWR1 403 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 HACE1Q8IYU2 909 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 DPF3Q92784 378 aa13.32□□□□□ -0.28
SCARB1-204ENST00000535005 ACAP3Q96P50 834 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms