RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 AMY1AP04745 511 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 FPR1P21462 350 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 NR4A1P22736 598 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 PCSK1P29120 753 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 ALDH1A3P47895 512 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC16A1P53985 500 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 NHLH2Q02577 135 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 ATXN7L2Q5T6C5 722 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 USP51Q70EK9 711 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 PNMA8AQ86V59 439 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC25A43Q8WUT9 341 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM193BQ96PV7 902 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 SMAD5Q99717 465 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 MRI1Q9BV20 369 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 MANSC1Q9H8J5 431 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 REXO2Q9Y3B8 237 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 CHST2Q9Y4C5 530 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 SPEF1Q9Y4P9 236 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 ACTL7AQ9Y615 435 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 CYR61O00622 381 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 GPR32O75388 356 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 RAP2AP10114 183 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 ZSCAN20P17040 1043 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 MCM7P33993 719 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 ODF1Q14990 250 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 EFCAB2Q5VUJ9 269 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 OTUD7BQ6GQQ9 843 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 RHOT1Q8IXI2 618 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 ZGPATQ8N5A5 531 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 IPPQ9Y573 584 aa5.29□□□□□ -1.56
ATPAF1-211ENST00000534216 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 hCG_2014768A0A024R1R8 64 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 DRGXA6NNA5 263 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 DIRC3C9JPN6 131 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 TEX33O43247 280 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 RPS6KA4O75676 772 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 ATP5JP18859 108 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 DDCP20711 480 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 MAKP20794 623 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 CCND1P24385 295 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 PTGS2P35354 604 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 CHN2P52757 468 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 RAP2BP61225 183 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM189BP81408 668 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 ATP8B2P98198 1209 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 KIF23Q02241 960 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 MTM1Q13496 603 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM102AQ5T9C2 384 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 METRNLQ641Q3 311 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 RHOUQ7L0Q8 258 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 MIGA2Q7L4E1 593 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 ZFPM1Q8IX07 1006 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 HDAC10Q969S8 669 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 LENG9Q96B70 501 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 COA7Q96BR5 231 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 MYOCQ99972 504 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC46A2Q9BY10 475 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 ZNF768Q9H5H4 540 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 NRDE2Q9H7Z3 1164 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 TRPM5Q9NZQ8 1165 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM30AQ9NZY2 134 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 SRRDQ9UH36 339 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC23A1Q9UHI7 598 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
ATPAF1-211ENST00000534216 SHROOM4Q9ULL8 1493 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 CCDC154A6NI56 674 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 ZNF185O15231 689 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 HTRA2O43464 458 aaPredicted RBP5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 POMCP01189 267 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 SLPIP03973 132 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 EDNRBP24530 442 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 ZFP36P26651 326 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 ANAPC15P60006 121 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 KLF10Q13118 480 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 TARDBPQ13148 414 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 SEM1Q6ZVN7 128 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 MRGPREQ86SM8 312 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 HAS1Q92839 578 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 PHACTR3Q96KR7 559 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 NEU1Q99519 415 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 TEX101Q9BY14 249 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 PCED1AQ9H1Q7 454 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 SERPINB13Q9UIV8 391 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 FZD1Q9UP38 647 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 RUVBL1Q9Y265 456 aaKnown RBP5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 PCDHA13Q9Y5I0 950 aa5.27□□□□□ -1.57
ATPAF1-211ENST00000534216 GAGE12BA1L429 117 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 RNASET2O00584 256 aaKnown RBP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 ZRANB2O95218 330 aaKnown RBP eCLIP5.26□□□□□ -1.57
ATPAF1-211ENST00000534216 ADH4P08319 380 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms