RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 FAM167AQ96KS9 214 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 ARID3AQ99856 593 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 SH2D3AQ9BRG2 576 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 REEP2Q9BRK0 252 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 AP5M1Q9H0R1 490 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 TSPY26PQ9H489 355 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 RNPEPQ9H4A4 650 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 DHX33Q9H6R0 707 aaKnown RBP6.78□□□□□ -1.32
CMTM1-220ENST00000534143 AZI2Q9H6S1 392 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 CYP26B1Q9NR63 512 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 ANO10Q9NW15 660 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 ERAP1Q9NZ08 941 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 CNTN3Q9P232 1028 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 PPME1Q9Y570 386 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 PCDHA2Q9Y5H9 948 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 FRMPD3Q5JV73 1810 aa6.78□□□□□ -1.32
CMTM1-220ENST00000534143 EVPLQ92817 2033 aa6.77□□□□□ -1.32
CMTM1-220ENST00000534143 IGKV6-21A0A0C4DH24 114 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 MYADML2A6NDP7 307 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 RSPH10B2B2RC85 870 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 H3BRB1 525 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 KPNA6O60684 536 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ADAMTS4O75173 837 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 F2P00734 622 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 RSPH10BP0C881 870 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 RARBP10826 455 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CST5P28325 142 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CNGA1P29973 690 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CPT1AP50416 773 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ZNF131P52739 623 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ATP11AP98196 1134 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 BEX3Q00994 111 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 COASYQ13057 564 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 PSMD2Q13200 908 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 STX1AQ16623 288 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 FSCN1Q16658 493 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 RSPO4Q2I0M5 234 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 DPCR1Q3MIW9 517 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 MTERF2Q49AM1 385 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ZNF658Q5TYW1 1059 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CEP135Q66GS9 1140 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CCSAPQ6IQ19 270 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 C11orf57Q6ZUT1 292 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 TRMT1LQ7Z2T5 733 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CCDC65Q8IXS2 484 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 DAW1Q8N136 415 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CEP120Q8N960 986 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 MLKLQ8NB16 471 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 TTC16Q8NEE8 873 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 KAT2BQ92831 832 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CCDC47Q96A33 483 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 CEP170P1Q96L14 293 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 FIZ1Q96SL8 496 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 TIPINQ9BVW5 301 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 TUT1Q9H6E5 874 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 POLD4Q9HCU8 107 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 XPNPEP1Q9NQW7 623 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 PANK4Q9NVE7 773 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 RMND1Q9NWS8 449 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 DDX20Q9UHI6 824 aaKnown RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 SALL4Q9UJQ4 1053 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 ODF2LQ9ULJ1 636 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 TRIP12Q14669 1992 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-220ENST00000534143 SCN10AQ9Y5Y9 1956 aa6.77□□□□□ -1.33
CMTM1-220ENST00000534143 SYNRGQ9UMZ2 1314 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 A6NHS1 94 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 DLL1O00548 723 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 MSCO60682 206 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 USO1O60763 962 aaKnown RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 HIP1RO75146 1068 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 MAFO75444 373 aaPredicted RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 PGK1P00558 417 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 KRT18P05783 430 aaKnown RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 C6orf222P0C671 652 aaPredicted RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 ZNF286BP0CG31 522 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 INSRRP14616 1297 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 IDEP14735 1019 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 GAP43P17677 238 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 MARK3P27448 753 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 ARL2P36404 184 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 PRCPP42785 496 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 PURAQ00577 322 aaKnown RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 RAD51AP2Q09MP3 1159 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 STK4Q13043 487 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 IQCB1Q15051 598 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 HS1BP3Q53T59 392 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 BRDTQ58F21 947 aaPredicted RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
CMTM1-220ENST00000534143 ZNF484Q5JVG2 852 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 FAM26FQ5R3K3 315 aa6.76□□□□□ -1.33
CMTM1-220ENST00000534143 XP32Q5T750 250 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms