RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 SUSD2Q9UGT4 822 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 MAN1B1Q9UKM7 699 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 CCPG1Q9ULG6 757 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 FZD1Q9UP38 647 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 ZHX2Q9Y6X8 837 aa6.36□□□□□ -1.39
CHKA-208ENST00000533910 WDR81Q562E7 1941 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TRPM7Q96QT4 1865 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 IGLV3-22A0A075B6J6 115 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 A0A087WWV3 80 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 FAM86B1E9PN63 330 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 VWA5AO00534 786 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 IKBKBO14920 756 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 RGS13O14921 159 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 CREB3O43889 395 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SMC2O95347 1197 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TIAF1O95411 115 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 FAM86B2P0C5J1 330 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 H2AFB1P0C5Y9 115 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 H2AFB2P0C5Z0 115 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 RAB6AP20340 208 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 HOXA13P31271 388 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 L1CAMP32004 1257 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 NF2P35240 595 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TECP42680 631 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TXKP42681 527 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 PREPP48147 710 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SPIRE1Q08AE8 756 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 NCAPHQ15003 741 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 ZRSR1Q15695 479 aaKnown RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 PTPROQ16827 1216 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SV2CQ496J9 727 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TMEM119Q4V9L6 283 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 CT47A1Q5JQC4 288 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 HYIQ5T013 277 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 YOD1Q5VVQ6 348 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 RRAGBQ5VZM2 374 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SARM1Q6SZW1 724 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 DLK2Q6UY11 383 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 CATSPERGQ6ZRH7 1159 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 CABP7Q86V35 215 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHKA-208ENST00000533910 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 ST13P5Q8NFI4 369 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 LRRC15Q8TF66 581 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SMARCE1Q969G3 411 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 LENG1Q96BZ8 264 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 CCDC74BQ96LY2 380 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 FAM20AQ96MK3 541 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 GSDMAQ96QA5 445 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SPATA9Q9BWV2 254 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 TTC12Q9H892 705 aaPredicted RBP6.35□□□□□ -1.39
CHKA-208ENST00000533910 TMOD4Q9NZQ9 345 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 LRWD1Q9UFC0 647 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 RABGAP1Q9Y3P9 1069 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SRCAPQ6ZRS2 3230 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 KIAA1217Q5T5P2 1943 aa6.35□□□□□ -1.39
CHKA-208ENST00000533910 SYNGAP1Q96PV0 1343 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 KDM3AQ9Y4C1 1321 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 A0A0G2JLL6 359 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 F8W735 103 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 BIN1O00499 593 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 NFIBO00712 420 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 DYNC1LI2O43237 492 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 AP5Z1O43299 807 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 ADCY3O60266 1144 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 ZBED4O75132 1171 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PPFIA4O75335 1185 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CFBP00751 764 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CST3P01034 146 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 EPHX1P07099 455 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CDC25AP30304 524 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PMS1P54277 932 aaKnown RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 MYL5Q02045 173 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PPATQ06203 517 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 GRB10Q13322 594 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PPIL2Q13356 520 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 MBTPS1Q14703 1052 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 KCNB1Q14721 858 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 COG2Q14746 738 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CBX2Q14781 532 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 HS1BP3Q53T59 392 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PRSS36Q5K4E3 855 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CDPF1Q6NVV7 123 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 FDX2Q6P4F2 183 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CNNM4Q6P4Q7 775 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 IGF2-ASQ6U949 168 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 NIPA1Q7RTP0 329 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 ERO1BQ86YB8 467 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 SMYD4Q8IYR2 804 aaPredicted RBP6.34□□□□□ -1.39
CHKA-208ENST00000533910 AOPEPQ8N6M6 819 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PPP1R13LQ8WUF5 828 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 TBC1D5Q92609 795 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 PPP1R14AQ96A00 147 aa6.34□□□□□ -1.39
CHKA-208ENST00000533910 CALML4Q96GE6 196 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms