RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NT5DC1Q5TFE4 455 aa19.92■□□□□ 0.78
UBXN1-216ENST00000533908 PARM1Q6UWI2 310 aa19.92■□□□□ 0.78
UBXN1-216ENST00000533908 FGF14Q92915 247 aa19.92■□□□□ 0.78
UBXN1-216ENST00000533908 KIFC3Q9BVG8 833 aa19.92■□□□□ 0.78
UBXN1-216ENST00000533908 WDR87Q6ZQQ6 2873 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 GVINP1Q7Z2Y8 2422 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 GPC5P78333 572 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 RSPO2Q6UXX9 243 aaPredicted RBP19.91■□□□□ 0.78
UBXN1-216ENST00000533908 C2orf40Q9H1Z8 148 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 SLC2A4RGQ9NR83 387 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 GDAQ9Y2T3 454 aa19.91■□□□□ 0.78
UBXN1-216ENST00000533908 VWA8A3KMH1 1905 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 CCL16O15467 120 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 SEC24BO95487 1268 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 C8AP07357 584 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 GLULP15104 373 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 NAMPTP43490 491 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 PHLDB3Q6NSJ2 640 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 C4orf32Q8N8J7 132 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 ITFG1Q8TB96 612 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 ARHGEF3Q9NR81 526 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 CDH7Q9ULB5 785 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 R4GN57 208 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 COL4A3Q01955 1670 aa19.9■□□□□ 0.78
UBXN1-216ENST00000533908 ARHGEF35A5YM69 484 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 LRRN2O75325 713 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 HNRNPA1P09651 372 aaKnown RBP eCLIP19.89■□□□□ 0.77
UBXN1-216ENST00000533908 OR52Z1P0C646 297 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 FGFR3P22607 806 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 OR1D2P34982 312 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 RAB33AQ14088 237 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 TMEM132AQ24JP5 1023 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 GLRA4Q5JXX5 417 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 PPM1LQ5SGD2 360 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 DCLRE1AQ6PJP8 1040 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 POTEHQ6S545 545 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 DEPTORQ8TB45 409 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 FGF13Q92913 245 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 FOXQ1Q9C009 403 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 SIT1Q9Y3P8 196 aa19.89■□□□□ 0.77
UBXN1-216ENST00000533908 NOTCH4Q99466 2003 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 CLCNKBP51801 687 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
UBXN1-216ENST00000533908 C3orf58Q8NDZ4 430 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 SLC7A14Q8TBB6 771 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 PPP1R10Q96QC0 940 aaKnown RBP19.88■□□□□ 0.77
UBXN1-216ENST00000533908 DNMT3BQ9UBC3 853 aaKnown RBP19.88■□□□□ 0.77
UBXN1-216ENST00000533908 POLIQ9UNA4 740 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 ZFP37Q9Y6Q3 630 aaPredicted RBP19.88■□□□□ 0.77
UBXN1-216ENST00000533908 ZNF292O60281 2723 aa19.88■□□□□ 0.77
UBXN1-216ENST00000533908 I3L4J1 428 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 RFX1P22670 979 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 HOXA9P31269 272 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 STARD6P59095 220 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 SOX4Q06945 474 aaPredicted RBP19.87■□□□□ 0.77
UBXN1-216ENST00000533908 NBR1Q14596 966 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 LIN9Q5TKA1 542 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 ATF7IP2Q5U623 682 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
UBXN1-216ENST00000533908 CEP120Q8N960 986 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 ERMNQ8TAM6 284 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 ADPGKQ9BRR6 497 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 BHMT2Q9H2M3 363 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 GOLGA2P5Q9HBQ8 144 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 MTRRQ9UBK8 725 aa19.87■□□□□ 0.77
UBXN1-216ENST00000533908 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 TMEM189-UBE2V1I3L0A0 370 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 B3GAT3O94766 335 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 SP9P0CG40 484 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 TKTP29401 623 aaKnown RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 BRCC3P46736 316 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 ELAVL2Q12926 359 aaKnown RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 SNW1Q13573 536 aaKnown RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 SAFBQ15424 915 aaKnown RBP eCLIP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 UPP1Q16831 310 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 TTC38Q5R3I4 469 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 CCDC83Q8IWF9 413 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 MAML2Q8IZL2 1156 aaPredicted RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 C8orf76Q96K31 380 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 FOXP1Q9H334 677 aaPredicted RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 MTF2Q9Y483 593 aaPredicted RBP19.86■□□□□ 0.77
UBXN1-216ENST00000533908 TRIP11Q15643 1979 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
UBXN1-216ENST00000533908 SMIM28A0A1B0GU29 152 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 CCT6AP40227 531 aaKnown RBP19.85■□□□□ 0.77
UBXN1-216ENST00000533908 RBM25P49756 843 aaKnown RBP19.85■□□□□ 0.77
UBXN1-216ENST00000533908 EFNA5P52803 228 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 PPP2R5AQ15172 486 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 UVSSAQ2YD98 709 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 DCAF4L1Q3SXM0 396 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 ALKAL1Q6UXT8 129 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 FBXO18Q8NFZ0 1043 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 PJA1Q8NG27 643 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 DDX27Q96GQ7 796 aaKnown RBP19.85■□□□□ 0.77
UBXN1-216ENST00000533908 PTPRHQ9HD43 1115 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 KIAA1024Q9UPX6 916 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 CDY1Q9Y6F8 540 aa19.85■□□□□ 0.77
UBXN1-216ENST00000533908 CACNA1IQ9P0X4 2223 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms