RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 DDX1Q92499 740 aaKnown RBP30.62■■■□□ 2.49
SAMD1-202ENST00000533683 SMARCAD1Q9H4L7 1026 aa30.62■■■□□ 2.49
SAMD1-202ENST00000533683 CNTNAP2Q9UHC6 1331 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 UNCXA6NJT0 531 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 VNN1O95497 513 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 BIRC3Q13489 604 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 TCEAL1Q15170 157 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 SEZ6Q53EL9 994 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 EXOC8Q8IYI6 725 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 RNF149Q8NC42 400 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 TRAPPC12Q8WVT3 735 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 DIS3Q9Y2L1 958 aaKnown RBP30.61■■■□□ 2.49
SAMD1-202ENST00000533683 CLDN3O15551 220 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 CETPP11597 493 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 HARSP12081 509 aaKnown RBP30.61■■■□□ 2.49
SAMD1-202ENST00000533683 KRT5P13647 590 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 PIK3CAP42336 1068 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 SLC26A2P50443 739 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 CCNA1P78396 465 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 MKRN3Q13064 507 aaKnown RBP30.61■■■□□ 2.49
SAMD1-202ENST00000533683 WDR44Q5JSH3 913 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 FAM81BQ96LP2 452 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 CTTNBP2NLQ9P2B4 639 aa30.61■■■□□ 2.49
SAMD1-202ENST00000533683 BTBD19C9JJ37 291 aa30.6■■■□□ 2.49
SAMD1-202ENST00000533683 ZNF792Q3KQV3 632 aa30.6■■■□□ 2.49
SAMD1-202ENST00000533683 KRT12Q99456 494 aa30.6■■■□□ 2.49
SAMD1-202ENST00000533683 MRPL4Q9BYD3 311 aaKnown RBP30.6■■■□□ 2.49
SAMD1-202ENST00000533683 TRPC6Q9Y210 931 aa30.6■■■□□ 2.49
SAMD1-202ENST00000533683 OAS2P29728 719 aaKnown RBP30.59■■■□□ 2.49
SAMD1-202ENST00000533683 GABPB1Q06547 395 aaPredicted RBP30.59■■■□□ 2.49
SAMD1-202ENST00000533683 CGRRF1Q99675 332 aa30.59■■■□□ 2.49
SAMD1-202ENST00000533683 PGRMC1O00264 195 aaKnown RBP30.59■■■□□ 2.49
SAMD1-202ENST00000533683 TOM1L1O75674 476 aa30.59■■■□□ 2.49
SAMD1-202ENST00000533683 ADORA2AP29274 412 aa30.59■■■□□ 2.49
SAMD1-202ENST00000533683 RASGEF1CQ8N431 466 aa30.59■■■□□ 2.49
SAMD1-202ENST00000533683 AENQ8WTP8 325 aaKnown RBP30.59■■■□□ 2.49
SAMD1-202ENST00000533683 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.59■■■□□ 2.492e-11■■□□□ 13.3
SAMD1-202ENST00000533683 CCL15-CCL14A0A0B4J2E2 113 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 FAM189A1O60320 539 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 GRIN3BO60391 1043 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 TNNT3P45378 269 aaPredicted RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 CCL15Q16663 113 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 SPOPLQ6IQ16 392 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 ZBTB8OSQ8IWT0 167 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 GDAP1L1Q96MZ0 367 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 ACO2Q99798 780 aaKnown RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 SLC45A1Q9Y2W3 748 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 NOC2LQ9Y3T9 749 aaKnown RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 PLXNA1Q9UIW2 1896 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 H3BQF6 201 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 DDX3YO15523 660 aaKnown RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 GTF2A2P52657 109 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 ARHGAP1Q07960 439 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 GJC2Q5T442 439 aaPredicted RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 TAPT1Q6NXT6 567 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 RHPN2Q8IUC4 686 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 OR5B17Q8NGF7 314 aa30.58■■■□□ 2.49
SAMD1-202ENST00000533683 CHORDC1Q9UHD1 332 aaPredicted RBP30.58■■■□□ 2.49
SAMD1-202ENST00000533683 HBP1O60381 514 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 CALCAP01258 141 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 PRKCBP05771 671 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 GLI1P08151 1106 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 TNFSF9P41273 254 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 MAPK6Q16659 721 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 ZBTB33Q86T24 672 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 BRI3BPQ8WY22 251 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 CALR3Q96L12 384 aaKnown RBP30.57■■■□□ 2.48
SAMD1-202ENST00000533683 JPH2Q9BR39 696 aaPredicted RBP30.57■■■□□ 2.48
SAMD1-202ENST00000533683 TCHPQ9BT92 498 aa30.57■■■□□ 2.48
SAMD1-202ENST00000533683 GJB1P08034 283 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 TNNC1P63316 161 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 ZBTB10Q96DT7 871 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 RNPEPQ9H4A4 650 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 ZCCHC17Q9NP64 241 aaKnown RBP30.56■■■□□ 2.48
SAMD1-202ENST00000533683 PLXNB2O15031 1838 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 ATMINO43313 823 aaPredicted RBP30.56■■■□□ 2.48
SAMD1-202ENST00000533683 BRSK2Q8IWQ3 736 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 ZBTB9Q96C00 473 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 VIPAS39Q9H9C1 493 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 APOBEC3GQ9HC16 384 aaKnown RBP30.56■■■□□ 2.48
SAMD1-202ENST00000533683 ALG6Q9Y672 507 aa30.56■■■□□ 2.48
SAMD1-202ENST00000533683 TNFRSF8P28908 595 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 C11orf63Q6NUN7 778 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 KLHL7Q8IXQ5 586 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 ZMYND15Q9H091 742 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 C2orf40Q9H1Z8 148 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 ABLIM1O14639 778 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 POLR3GO15318 223 aaPredicted RBP30.55■■■□□ 2.48
SAMD1-202ENST00000533683 DCAF12L1Q5VU92 463 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 ZNF668Q96K58 619 aaPredicted RBP30.55■■■□□ 2.48
SAMD1-202ENST00000533683 AP1M1Q9BXS5 423 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 ERAP1Q9NZ08 941 aa30.55■■■□□ 2.48
SAMD1-202ENST00000533683 MTA2O94776 668 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 HEXIM1O94992 359 aaKnown RBP30.54■■■□□ 2.48
SAMD1-202ENST00000533683 GPS2Q13227 327 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 LAMC2Q13753 1193 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 EFCAB12Q6NXP0 572 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 MAMDC4Q6UXC1 1216 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 PLEKHA4Q9H4M7 779 aa30.54■■■□□ 2.48
SAMD1-202ENST00000533683 GDF3Q9NR23 364 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms