RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 GRAP2O75791 330 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SGPL1O95470 568 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ZBED1O96006 694 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SLC4A1P02730 911 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ADORA2BP29275 332 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 MDH1P40925 334 aaKnown RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 ACTN3Q08043 901 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 NCOA4Q13772 614 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SURF1Q15526 300 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 IZUMO3Q5VZ72 239 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 RHOT1Q8IXI2 618 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SYN2Q92777 582 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 TXNDC9O14530 226 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 CPP00450 1065 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 RARBP10826 455 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 TCF7P36402 384 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 RGS7P49802 495 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ORC1Q13415 861 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 TNFRSF25Q93038 417 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ACSF2Q96CM8 615 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 AGAP1Q9UPQ3 857 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 PFASO15067 1338 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 EIF3HO15372 352 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■■■■ 31.8
RAD50-209ENST00000533482 RPS12P25398 132 aaKnown RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 LSP1P33241 339 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CFAP61Q8NHU2 1237 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAD50-209ENST00000533482 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CLCN3P51790 818 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CNTN2Q02246 1040 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 KYNUQ16719 465 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 SLIT3O75094 1523 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 ARL4AP40617 200 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 CCL15Q16663 113 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 SPATA20Q8TB22 786 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 NSMCE1Q8WV22 266 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
RAD50-209ENST00000533482 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
RAD50-209ENST00000533482 SLITRK3O94933 977 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 RFX1P22670 979 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 NPTX2P47972 431 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 PDIA2Q13087 525 aaKnown RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 FBXW10Q5XX13 1052 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ATG4AQ8WYN0 398 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 G3BP2Q9UN86 482 aaKnown RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 A0A0G2JND7 137 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 GOLGA8RI6L899 631 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ABCD1P33897 745 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 HSD17B3P37058 310 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 SLC12A2P55011 1212 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ANKMY2Q8IV38 441 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 A8MXQ7 604 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 GUCY2CP25092 1073 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 ARSEP51690 589 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
RAD50-209ENST00000533482 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 CDK17Q00537 523 aa13.18□□□□□ -0.3
RAD50-209ENST00000533482 TMEM119Q4V9L6 283 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms