RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 NXPE3Q969Y0 559 aa25.18■■□□□ 1.62
PKP3-210ENST00000533249 IFT74Q96LB3 600 aa25.18■■□□□ 1.62
PKP3-210ENST00000533249 BHMT2Q9H2M3 363 aa25.18■■□□□ 1.62
PKP3-210ENST00000533249 FBXW11Q9UKB1 542 aa25.18■■□□□ 1.62
PKP3-210ENST00000533249 DOCK6Q96HP0 2047 aa25.17■■□□□ 1.62
PKP3-210ENST00000533249 PTPRZ1P23471 2315 aaPredicted RBP25.17■■□□□ 1.62
PKP3-210ENST00000533249 SRFP11831 508 aa25.17■■□□□ 1.62
PKP3-210ENST00000533249 FSHRP23945 695 aa25.17■■□□□ 1.62
PKP3-210ENST00000533249 NBR1Q14596 966 aa25.17■■□□□ 1.62
PKP3-210ENST00000533249 GRASPQ7Z6J2 395 aaPredicted RBP25.17■■□□□ 1.62
PKP3-210ENST00000533249 LLPHQ9BRT6 129 aaKnown RBP25.17■■□□□ 1.62
PKP3-210ENST00000533249 ADAM12O43184 909 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 NTHL1P78549 312 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 ELAVL2Q12926 359 aaKnown RBP25.16■■□□□ 1.62
PKP3-210ENST00000533249 ANGPT1Q15389 498 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 DCAF4L1Q3SXM0 396 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 GLRA4Q5JXX5 417 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 PPM1LQ5SGD2 360 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 FBXO18Q8NFZ0 1043 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 GPR152Q8TDT2 470 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 LRWD1Q9UFC0 647 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 POLIQ9UNA4 740 aa25.16■■□□□ 1.62
PKP3-210ENST00000533249 C8AP07357 584 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 MUTP22033 750 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 RBM25P49756 843 aaKnown RBP25.15■■□□□ 1.62
PKP3-210ENST00000533249 EFNA5P52803 228 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 HTR4Q13639 388 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 C8orf34Q49A92 452 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 NT5DC1Q5TFE4 455 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 ATF7IP2Q5U623 682 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 FAM184AQ8NB25 1140 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 KIFAP3Q92845 792 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 NKD2Q969F2 451 aaPredicted RBP25.15■■□□□ 1.62
PKP3-210ENST00000533249 TBC1D17Q9HA65 648 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 NOL7Q9UMY1 257 aaKnown RBP25.15■■□□□ 1.62
PKP3-210ENST00000533249 KIAA1024Q9UPX6 916 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 NUMBLQ9Y6R0 609 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 VWA8A3KMH1 1905 aa25.15■■□□□ 1.62
PKP3-210ENST00000533249 ANHXE9PGG2 379 aa25.14■■□□□ 1.62
PKP3-210ENST00000533249 CCL16O15467 120 aa25.14■■□□□ 1.62
PKP3-210ENST00000533249 HNRNPA1P09651 372 aaKnown RBP eCLIP25.14■■□□□ 1.62
PKP3-210ENST00000533249 IGFBP6P24592 240 aaPredicted RBP25.14■■□□□ 1.62
PKP3-210ENST00000533249 FXR2P51116 673 aaKnown RBP eCLIP25.14■■□□□ 1.621e-6■□□□□ 9.4
PKP3-210ENST00000533249 PDXDC1Q6P996 788 aa25.14■■□□□ 1.62
PKP3-210ENST00000533249 C4orf32Q8N8J7 132 aa25.14■■□□□ 1.62
PKP3-210ENST00000533249 DDX19AQ9NUU7 478 aaKnown RBP25.14■■□□□ 1.62
PKP3-210ENST00000533249 RIF1Q5UIP0 2472 aaKnown RBP25.14■■□□□ 1.61
PKP3-210ENST00000533249 CFAP54Q96N23 3096 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 B3GAT3O94766 335 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 OR1D2P34982 312 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 TRAPPC10P48553 1259 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 HMGN5P82970 282 aaKnown RBP25.13■■□□□ 1.61
PKP3-210ENST00000533249 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.13■■□□□ 1.61
PKP3-210ENST00000533249 SNX29Q8TEQ0 813 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 MYO15AQ9UKN7 3530 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 TRIP11Q15643 1979 aa25.13■■□□□ 1.61
PKP3-210ENST00000533249 K7ERI5 159 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 CLCNKBP51801 687 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 SLC7A14Q8TBB6 771 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 PPP1R10Q96QC0 940 aaKnown RBP25.12■■□□□ 1.61
PKP3-210ENST00000533249 RPP25Q9BUL9 199 aaKnown RBP25.12■■□□□ 1.61
PKP3-210ENST00000533249 GOLGA2P5Q9HBQ8 144 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 ARHGEF3Q9NR81 526 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 CDH7Q9ULB5 785 aa25.12■■□□□ 1.61
PKP3-210ENST00000533249 ZFP37Q9Y6Q3 630 aaPredicted RBP25.12■■□□□ 1.61
PKP3-210ENST00000533249 FAM186AA6NE01 2351 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 CCDC169A6NNP5 214 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 XYLBO75191 536 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 FGFR3P22607 806 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 SPECC1Q5M775 1068 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 AXDND1Q5T1B0 1012 aaPredicted RBP25.11■■□□□ 1.61
PKP3-210ENST00000533249 DCLRE1AQ6PJP8 1040 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 PARM1Q6UWI2 310 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 APBB1IPQ7Z5R6 666 aaPredicted RBP25.11■■□□□ 1.61
PKP3-210ENST00000533249 CEP120Q8N960 986 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 FGF14Q92915 247 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 ZSCAN31Q96LW9 406 aaPredicted RBP25.11■■□□□ 1.61
PKP3-210ENST00000533249 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
PKP3-210ENST00000533249 TNFSF13BQ9Y275 285 aa25.11■■□□□ 1.61
PKP3-210ENST00000533249 E9PMD0 336 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 TMEM189-UBE2V1I3L0A0 370 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 I3L4J1 428 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 HOXA9P31269 272 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 PEX3P56589 373 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 OSTNP61366 133 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 RAB33AQ14088 237 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 BACH2Q9BYV9 841 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 SLC2A4RGQ9NR83 387 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 MTRRQ9UBK8 725 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 CDY1Q9Y6F8 540 aa25.1■■□□□ 1.61
PKP3-210ENST00000533249 PP2D1A8MPX8 630 aa25.09■■□□□ 1.61
PKP3-210ENST00000533249 DCNP07585 359 aaKnown RBP25.09■■□□□ 1.61
PKP3-210ENST00000533249 TKTP29401 623 aaKnown RBP25.09■■□□□ 1.61
PKP3-210ENST00000533249 BRCC3P46736 316 aa25.09■■□□□ 1.61
PKP3-210ENST00000533249 YARSP54577 528 aaKnown RBP25.09■■□□□ 1.61
PKP3-210ENST00000533249 PTGDRQ13258 359 aa25.09■■□□□ 1.61
PKP3-210ENST00000533249 PDIA5Q14554 519 aa25.09■■□□□ 1.61
PKP3-210ENST00000533249 ZNF568Q3ZCX4 644 aa25.09■■□□□ 1.61
PKP3-210ENST00000533249 RSPO2Q6UXX9 243 aaPredicted RBP25.09■■□□□ 1.61
PKP3-210ENST00000533249 ITFG1Q8TB96 612 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms