RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 FAM50BQ9Y247 325 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
CPSF1-210ENST00000532935 ANK1P16157 1881 aa16.82■□□□□ 0.28
CPSF1-210ENST00000532935 HNRNPDLO14979 420 aaKnown RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 MBTPS2O43462 519 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 PIGRP01833 764 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 GAP43P17677 238 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 MATR3P43243 847 aaKnown RBP eCLIP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 LIG4P49917 911 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 GTF2BQ00403 316 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 COASYQ13057 564 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 SMAD4Q13485 552 aaKnown RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 HSP90AA2PQ14568 343 aaPredicted RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 E2F4Q16254 413 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 XKR4Q5GH76 650 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 GLRA4Q5JXX5 417 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 LLGL2Q6P1M3 1020 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 ALKAL1Q6UXT8 129 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 TMEM184AQ6ZMB5 413 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 DHX58Q96C10 678 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 SNX27Q96L92 541 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 HAPLN2Q9GZV7 340 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 ST6GALNAC4Q9H4F1 302 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 MRPL17Q9NRX2 175 aaKnown RBP16.81■□□□□ 0.28
CPSF1-210ENST00000532935 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 RCOR1Q9UKL0 485 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 ADAM28Q9UKQ2 775 aa16.81■□□□□ 0.28
CPSF1-210ENST00000532935 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 LILRB3O75022 631 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 TADA2AO75478 443 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 URODP06132 367 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 ZC2HC1CQ53FD0 456 aaPredicted RBP16.8■□□□□ 0.28
CPSF1-210ENST00000532935 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 ZNF720Q7Z2F6 126 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 MAP4K3Q8IVH8 894 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 IQUBQ8NA54 791 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 GPR62Q9BZJ7 368 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 TNMDQ9H2S6 317 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 CUEDC2Q9H467 287 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 HCFC2Q9Y5Z7 792 aa16.8■□□□□ 0.28
CPSF1-210ENST00000532935 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPSF1-210ENST00000532935 FRMD3A2A2Y4 597 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 TNFRSF10AO00220 468 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 C2CD2LO14523 706 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 MEFVO15553 781 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-210ENST00000532935 KIF4AO95239 1232 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 IDEP14735 1019 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 KCNE1P15382 129 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 GLUD2P49448 558 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 KRT85P78386 507 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 DSG1Q02413 1049 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
CPSF1-210ENST00000532935 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 ANKRD54Q6NXT1 300 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 STAMQ92783 540 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 CASP10Q92851 521 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 EMILIN2Q9BXX0 1053 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 MRPL44Q9H9J2 332 aaKnown RBP16.79■□□□□ 0.28
CPSF1-210ENST00000532935 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 KBTBD4Q9NVX7 518 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 CNTN3Q9P232 1028 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 SSX2IPQ9Y2D8 614 aa16.79■□□□□ 0.28
CPSF1-210ENST00000532935 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
CPSF1-210ENST00000532935 PPP1R37O75864 691 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
CPSF1-210ENST00000532935 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 USP41Q3LFD5 358 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 HERC4Q5GLZ8 1057 aaPredicted RBP16.78■□□□□ 0.28
CPSF1-210ENST00000532935 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
CPSF1-210ENST00000532935 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 CHAMP1Q96JM3 812 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 UROC1Q96N76 676 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 ZMAT2Q96NC0 199 aaKnown RBP16.78■□□□□ 0.28
CPSF1-210ENST00000532935 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 STRA6Q9BX79 667 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 OLFML3Q9NRN5 406 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 SLC38A7Q9NVC3 462 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 TBC1D7Q9P0N9 293 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CPSF1-210ENST00000532935 A0A0B4J269 797 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 OGTO15294 1046 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 CLTAP09496 248 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 CXCL8P10145 99 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 KLRC2P26717 231 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 CLCNKBP51801 687 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 AMPD3Q01432 767 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms