RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 LPXNO60711 386 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 GALTP07902 379 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 CXCL8P10145 99 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 GARTP22102 1010 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 SLC11A1P49279 550 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 ACOT2P49753 483 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 DSC1Q08554 894 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 GRIK3Q13003 919 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 ADGRE1Q14246 886 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 GLRA4Q5JXX5 417 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 COLGALT2Q8IYK4 626 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 ZSWIM2Q8NEG5 633 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 FAM193BQ96PV7 902 aaPredicted RBP27.05■■□□□ 1.92
USP48-214ENST00000532737 RMND1Q9NWS8 449 aa27.05■■□□□ 1.92
USP48-214ENST00000532737 SMIM28A0A1B0GU29 152 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 NT5C1B-RDH14C9J2C7 533 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 NAB2Q15742 525 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 ENOX2Q16206 610 aaKnown RBP27.04■■□□□ 1.92
USP48-214ENST00000532737 CAMK4Q16566 473 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 CRELD2Q6UXH1 353 aaPredicted RBP27.04■■□□□ 1.92
USP48-214ENST00000532737 P2RX5Q93086 422 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 SAAL1Q96ER3 474 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 ZMAT2Q96NC0 199 aaKnown RBP27.04■■□□□ 1.92
USP48-214ENST00000532737 C11orf84Q9BUA3 381 aaPredicted RBP27.04■■□□□ 1.92
USP48-214ENST00000532737 PCIF1Q9H4Z3 704 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 AGPAT3Q9NRZ7 376 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 MAPK8IP1Q9UQF2 711 aa27.04■■□□□ 1.92
USP48-214ENST00000532737 ITGB1P05556 798 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 THP07101 528 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 KCNE1P15382 129 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 ALDH7A1P49419 539 aaKnown RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 ARMCX5Q6P1M9 558 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 SMYD4Q8IYR2 804 aaPredicted RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 SLC39A11Q8N1S5 342 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 PPP1R10Q96QC0 940 aaKnown RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 GAS2L1Q99501 681 aaPredicted RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 TMEM175Q9BSA9 504 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 RPF1Q9H9Y2 349 aaKnown RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 ALG13Q9NP73 1137 aaKnown RBP27.03■■□□□ 1.92
USP48-214ENST00000532737 CNTN3Q9P232 1028 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 REV3LO60673 3130 aa27.03■■□□□ 1.92
USP48-214ENST00000532737 KIAA1671Q9BY89 1806 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 TRANK1O15050 2925 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 TTC26A0AVF1 554 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 GOLGA8IPA6NC78 632 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 GOLGA8JA6NMD2 632 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 CLIC2O15247 247 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 GRM6O15303 877 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 FGF18O76093 207 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 ALDH2P05091 517 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 TMEM173Q86WV6 379 aaPredicted RBP27.02■■□□□ 1.92
USP48-214ENST00000532737 GPT2Q8TD30 523 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 FAM213AQ9BRX8 229 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 KCTD10Q9H3F6 313 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 PLEKHA5Q9HAU0 1116 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 PRDM6Q9NQX0 595 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 SPG21Q9NZD8 308 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 MAN1B1Q9UKM7 699 aa27.02■■□□□ 1.92
USP48-214ENST00000532737 LACTBL1A8MY62 500 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 NRP1O14786 923 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 ADRB2P07550 413 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 SNRPFP62306 86 aaKnown RBP27.01■■□□□ 1.91
USP48-214ENST00000532737 TUSC3Q13454 348 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 ZNF658Q5TYW1 1059 aaPredicted RBP27.01■■□□□ 1.91
USP48-214ENST00000532737 ISM2Q6H9L7 571 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 HS2ST1Q7LGA3 356 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 GUF1Q8N442 669 aaKnown RBP27.01■■□□□ 1.91
USP48-214ENST00000532737 SPPL3Q8TCT6 385 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 BCL7CQ8WUZ0 217 aaPredicted RBP27.01■■□□□ 1.91
USP48-214ENST00000532737 CLSTN2Q9H4D0 955 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 CACNG4Q9UBN1 327 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 RALGAPA2Q2PPJ7 1873 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 NLRC5Q86WI3 1866 aa27.01■■□□□ 1.91
USP48-214ENST00000532737 EXTL3O43909 919 aa27■■□□□ 1.91
USP48-214ENST00000532737 PPM1AP35813 382 aa27■■□□□ 1.91
USP48-214ENST00000532737 OR1G1P47890 313 aa27■■□□□ 1.91
USP48-214ENST00000532737 SPAG1Q07617 926 aa27■■□□□ 1.91
USP48-214ENST00000532737 RABGGTAQ92696 567 aa27■■□□□ 1.91
USP48-214ENST00000532737 HSPBP1Q9NZL4 362 aa27■■□□□ 1.91
USP48-214ENST00000532737 FAN1Q9Y2M0 1017 aa27■■□□□ 1.91
USP48-214ENST00000532737 PRG3Q9Y2Y8 225 aaPredicted RBP27■■□□□ 1.91
USP48-214ENST00000532737 LDHAP00338 332 aaKnown RBP26.99■■□□□ 1.91
USP48-214ENST00000532737 DNAJB1P25685 340 aa26.99■■□□□ 1.91
USP48-214ENST00000532737 PLCB3Q01970 1234 aa26.99■■□□□ 1.91
USP48-214ENST00000532737 PPP2R3AQ06190 1150 aa26.99■■□□□ 1.91
USP48-214ENST00000532737 FAM212AQ96EL1 285 aa26.99■■□□□ 1.91
USP48-214ENST00000532737 PAAF1Q9BRP4 392 aa26.99■■□□□ 1.91
USP48-214ENST00000532737 CGNQ9P2M7 1197 aaKnown RBP26.99■■□□□ 1.91
USP48-214ENST00000532737 NCOR1O75376 2440 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 MUC3AQ02505 3323 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 CASTOR2A6NHX0 329 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 F8W810 466 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 BIN1O00499 593 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 PDXKO00764 312 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 KIAA0391O15091 583 aaKnown RBP26.98■■□□□ 1.91
USP48-214ENST00000532737 KIF20AO95235 890 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 IGFBP4P22692 258 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 CYP2J2P51589 502 aa26.98■■□□□ 1.91
USP48-214ENST00000532737 POU5F1Q01860 360 aaKnown RBP26.98■■□□□ 1.91
USP48-214ENST00000532737 SOX4Q06945 474 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms