RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NOP14P78316 857 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 KYAT1Q16773 422 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 SGSM1Q2NKQ1 1148 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 ZBED8Q8IZ13 594 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 IDI2Q9BXS1 227 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 GTF3C4Q9UKN8 822 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 L1RE1Q9UN81 338 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 COPEO14579 308 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 GSTA1P08263 222 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 GSTA2P09210 222 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 PLA2G4AP47712 749 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ARSEP51690 589 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 GRIK5Q16478 980 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ZNF720Q7Z2F6 126 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 DDX42Q86XP3 938 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ATP11CQ8NB49 1132 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 PI4K2BG5E9Z4 385 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 EXTL3O43909 919 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 GPC4O75487 556 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 MDH1P40925 334 aaKnown RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 PSMC6P62333 389 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 DDR1Q08345 913 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TTC17Q96AE7 1141 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ERP44Q9BS26 406 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TARS2Q9BW92 718 aaKnown RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 CDH6P55285 790 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ATG16L1Q676U5 607 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 TBC1D1Q86TI0 1168 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 C2orf69Q8N8R5 385 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 RNF139Q8WU17 664 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 WDR35Q9P2L0 1181 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ATMINO43313 823 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 DCTN3O75935 186 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 MYL3P08590 195 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 HP1BP3Q5SSJ5 553 aaPredicted RBP16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 THAP2Q9H0W7 228 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 GPRC5CQ9NQ84 441 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 SLC12A6Q9UHW9 1150 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 STAP1Q9ULZ2 295 aa16.24■□□□□ 0.19
PCDHA3-202ENST00000532566 ITIH2P19823 946 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 ZNF449Q6P9G9 518 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 ZNF677Q86XU0 584 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 RCOR2Q8IZ40 523 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 PDCD7Q8N8D1 485 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 PSD3Q9NYI0 1048 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 AGTP01019 485 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 ACTR2P61160 394 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 STAT4Q14765 748 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 CBWD1Q9BRT8 395 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 PI4K2AQ9BTU6 479 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 PACSIN1Q9BY11 444 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 TRIM55Q9BYV6 548 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 MID2Q9UJV3 735 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 GTPBP10A4D1E9 387 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 A8MXQ7 604 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 GUCY2CP25092 1073 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 TRMT10CQ7L0Y3 403 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 ACAP3Q96P50 834 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 NOL3O60936 208 aaKnown RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 ROR1Q01973 937 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 KCND1Q9NSA2 647 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 KLHL8Q9P2G9 620 aaPredicted RBP16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
PCDHA3-202ENST00000532566 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 EIF3HO15372 352 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 THOC1Q96FV9 657 aaKnown RBP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 OSBPL8Q9BZF1 889 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 LRRC14Q15048 493 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 GSDMBQ8TAX9 411 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 KLHL11Q9NVR0 708 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 NFIBO00712 420 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 ESRRAP11474 423 aaPredicted RBP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 TMPRSS15P98073 1019 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 THOC5Q13769 683 aaKnown RBP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 PPM1NQ8N819 430 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 MAML1Q92585 1016 aa16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 DMGDHQ9UI17 866 aaKnown RBP16.22■□□□□ 0.19
PCDHA3-202ENST00000532566 FAM86B1E9PN63 330 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms