RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 GPR153Q6NV75 609 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 ALKAL1Q6UXT8 129 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 CD302Q8IX05 232 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 ZNF558Q96NG5 402 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 TSG101Q99816 390 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 NRDE2Q9H7Z3 1164 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 CERS4Q9HA82 394 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 CNTN3Q9P232 1028 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 TRAF3IP3Q9Y228 551 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 PCDHB12Q9Y5F1 795 aa24.24■■□□□ 1.47
LRRK1-208ENST00000532029 SMIM28A0A1B0GU29 152 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 CARNS1A5YM72 827 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 TULP1O00294 542 aaPredicted RBP24.23■■□□□ 1.47
LRRK1-208ENST00000532029 PTGESO14684 152 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 EXOC3O60645 756 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 NR3C1P04150 777 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 BMP6P22004 513 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 BMPR1AP36894 532 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 GLRA4Q5JXX5 417 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 CRELD2Q6UXH1 353 aaPredicted RBP24.23■■□□□ 1.47
LRRK1-208ENST00000532029 ZNF280BQ86YH2 543 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 COLGALT1Q8NBJ5 622 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 ZSWIM2Q8NEG5 633 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 ARNTL2Q8WYA1 636 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 DHTKD1Q96HY7 919 aaPredicted RBP24.23■■□□□ 1.47
LRRK1-208ENST00000532029 CXCL16Q9H2A7 254 aa24.23■■□□□ 1.47
LRRK1-208ENST00000532029 RBAKQ9NYW8 714 aaPredicted RBP24.23■■□□□ 1.47
LRRK1-208ENST00000532029 TTC26A0AVF1 554 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 ZNF233A6NK53 670 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 LACTBL1A8MY62 500 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 DDHD2O94830 711 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 KCNE1P15382 129 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 RPL13P26373 211 aaKnown RBP24.22■■□□□ 1.47
LRRK1-208ENST00000532029 MYBPC2Q14324 1141 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 KLHL40Q2TBA0 621 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 EPC2Q52LR7 807 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 KLHL10Q6JEL2 608 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 SPRED2Q7Z698 418 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 SLC9A9Q8IVB4 645 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 FBXO22Q8NEZ5 403 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 TMEM175Q9BSA9 504 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 SEMA6BQ9H3T3 888 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 SLC38A7Q9NVC3 462 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 PLAGL2Q9UPG8 496 aa24.22■■□□□ 1.47
LRRK1-208ENST00000532029 MEFVO15553 781 aaPredicted RBP24.21■■□□□ 1.47
LRRK1-208ENST00000532029 IL18RAPO95256 599 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 RB1P06400 928 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 LINC00271P0C7V0 271 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 ALDH7A1P49419 539 aaKnown RBP24.21■■□□□ 1.47
LRRK1-208ENST00000532029 BCAR1P56945 870 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 TUSC3Q13454 348 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 CENPPQ6IPU0 288 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 CAVIN1Q6NZI2 390 aaKnown RBP24.21■■□□□ 1.47
LRRK1-208ENST00000532029 KCNT2Q6UVM3 1135 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 BRSK2Q8IWQ3 736 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 P2RX5Q93086 422 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 KIF12Q96FN5 646 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 PPP1R10Q96QC0 940 aaKnown RBP24.21■■□□□ 1.47
LRRK1-208ENST00000532029 TSPAN18Q96SJ8 248 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 PLVAPQ9BX97 442 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 TTYH1Q9H313 450 aaPredicted RBP24.21■■□□□ 1.47
LRRK1-208ENST00000532029 ASB7Q9H672 318 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 DNAJB4Q9UDY4 337 aa24.21■■□□□ 1.47
LRRK1-208ENST00000532029 LAMA3Q16787 3333 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 PPP1R3GB7ZBB8 358 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 ALDH2P05091 517 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 ADRB2P07550 413 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 CD44P16070 742 aaKnown RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 NR2F2P24468 414 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 CCNE1P24864 410 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 PPM1AP35813 382 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 OR1G1P47890 313 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 DSC1Q08554 894 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 SNRNP35Q16560 246 aaKnown RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 NFIL3Q16649 462 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 SKOR2Q2VWA4 1001 aaPredicted RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 EDRF1Q3B7T1 1238 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 ZCWPW2Q504Y3 356 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 RBM43Q6ZSC3 357 aaKnown RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 CBWD2Q8IUF1 395 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 COLGALT2Q8IYK4 626 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 MLKLQ8NB16 471 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 RDH13Q8NBN7 331 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 TMEM174Q8WUU8 243 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 FBXL18Q96ME1 805 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 ZMAT2Q96NC0 199 aaKnown RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 C11orf84Q9BUA3 381 aaPredicted RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 DMAC2Q9NW81 257 aa24.2■■□□□ 1.46
LRRK1-208ENST00000532029 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.2■■□□□ 1.46
LRRK1-208ENST00000532029 XPOTO43592 962 aaKnown RBP24.19■■□□□ 1.46
LRRK1-208ENST00000532029 B4GALT3O60512 393 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 GALTP07902 379 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 SLC11A1P49279 550 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 NLRP12P59046 1061 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 LRRC63Q05C16 580 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 SPAG1Q07617 926 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 NELFBQ8WX92 580 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 SPG21Q9NZD8 308 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 TMEM63CQ9P1W3 806 aa24.19■■□□□ 1.46
LRRK1-208ENST00000532029 CTNND2Q9UQB3 1225 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms