RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SLFN11Q7Z7L1 901 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 GBP7Q8N8V2 638 aaPredicted RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 ZSWIM2Q8NEG5 633 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 PGM2Q96G03 612 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 RPS6KC1Q96S38 1066 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ARL2BPQ9Y2Y0 163 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 C21orf2O43822 256 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ALCAMQ13740 583 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 AUHQ13825 339 aaKnown RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 TTC27Q6P3X3 843 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ZBED8Q8IZ13 594 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 PPP1R14CQ8TAE6 165 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 RSAD2Q8WXG1 361 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 CFAP57Q96MR6 1250 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 UVRAGQ9P2Y5 699 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 GABBR1Q9UBS5 961 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 GTF3C4Q9UKN8 822 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 SUFUQ9UMX1 484 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ANKRD63C9JTQ0 380 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ZBED4O75132 1171 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 PSMD10O75832 226 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 APBA3O96018 575 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 CREB1P16220 341 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 VCAM1P19320 739 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ERFP50548 548 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 BPIFB4P59827 614 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 TAF11Q15544 211 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 LLGL2Q6P1M3 1020 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 SUPT20HQ8NEM7 779 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 PRCCQ92733 491 aaPredicted RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 LENG9Q96B70 501 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 TRAIPQ9BWF2 469 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
NXF1-211ENST00000531709 FNTAP49354 379 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 ELF3P78545 371 aaPredicted RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 ZRSR2Q15696 482 aaKnown RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 ANKRD20A3Q5VUR7 823 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 LRRC37BQ96QE4 947 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 YY1AP1Q9H869 796 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
NXF1-211ENST00000531709 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.07□□□□□ -0.48
NXF1-211ENST00000531709 STXBP5LQ9Y2K9 1186 aa12.07□□□□□ -0.48
NXF1-211ENST00000531709 CFAP73A6NFT4 308 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 CDH16O75309 829 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 SKAP2O75563 359 aaPredicted RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 ANP32DO95626 131 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 KRT10P13645 584 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 KCNJ2P63252 427 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 PRKG1Q13976 671 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 BMT2Q1RMZ1 405 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 BBS9Q3SYG4 887 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 SWSAP1Q6NVH7 229 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 SCARA5Q6ZMJ2 495 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 MORC4Q8TE76 937 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 A0A0G2JND7 137 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 NFIBO00712 420 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 OSTNP61366 133 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 CDR2Q01850 454 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 PPATQ06203 517 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 SPRED3Q2MJR0 410 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 FAM160B2Q86V87 743 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 EXOC3L1Q86VI1 746 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 MKL1Q969V6 931 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 KLF6Q99612 283 aaPredicted RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 CIITAP33076 1130 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 CHKAP35790 457 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ARSEP51690 589 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 C11orf63Q6NUN7 778 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ZBTB33Q86T24 672 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ROPN1BQ9BZX4 212 aaPredicted RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 ROPN1Q9HAT0 212 aaPredicted RBP12.06□□□□□ -0.48
NXF1-211ENST00000531709 KCND2Q9NZV8 630 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
NXF1-211ENST00000531709 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
NXF1-211ENST00000531709 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
NXF1-211ENST00000531709 GJB6O95452 261 aa12.05□□□□□ -0.48
NXF1-211ENST00000531709 TROVE2P10155 538 aaKnown RBP eCLIP12.05□□□□□ -0.48
NXF1-211ENST00000531709 GNA15P30679 374 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms