RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 DCLRE1AQ6PJP8 1040 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 ALKAL1Q6UXT8 129 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 DAW1Q8N136 415 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 TMEM105Q8N8V8 129 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 SNX29Q8TEQ0 813 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 ARHGAP28Q9P2N2 729 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 FBXW11Q9UKB1 542 aa14.66□□□□□ -0.06
AMBRA1-210ENST00000531542 CASTOR2A6NHX0 329 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 ANHXE9PGG2 379 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 SPATA31D3P0C874 917 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 FGFR3P22607 806 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 GRM5P41594 1212 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 NPTX2P47972 431 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 RAB33AQ14088 237 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 NBR1Q14596 966 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 UPP1Q16831 310 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 HYIQ5T013 277 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 DTHD1Q6ZMT9 781 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 SPATA31D4Q6ZUB0 917 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 C1orf186Q6ZWK4 172 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 KCNN1Q92952 543 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 PHOX2BQ99453 314 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 ACO2Q99798 780 aaKnown RBP14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 KIFC3Q9BVG8 833 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 MFSD1Q9H3U5 465 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
AMBRA1-210ENST00000531542 TRAPPC3O43617 180 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 LAMP2P13473 410 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 NPR3P17342 541 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 RPL17P18621 184 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 AOC1P19801 751 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 PROZP22891 400 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 GUCY2CP25092 1073 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 GBP2P32456 591 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 PSMD5Q16401 504 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 IL17AQ16552 155 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 RINT1Q6NUQ1 792 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 PRSS55Q6UWB4 352 aaPredicted RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 SLC44A3Q8N4M1 653 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 SPIRE2Q8WWL2 714 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 DDX27Q96GQ7 796 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 MYADMQ96S97 322 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 MMTAG2Q9BU76 263 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 MRPL4Q9BYD3 311 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 CXCL16Q9H2A7 254 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 CACNG4Q9UBN1 327 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 USP20Q9Y2K6 914 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 GDAQ9Y2T3 454 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 BACE2Q9Y5Z0 518 aa14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 TDRD15B5MCY1 1934 aaKnown RBP14.64□□□□□ -0.07
AMBRA1-210ENST00000531542 ZFHX2Q9C0A1 2572 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 SMIM28A0A1B0GU29 152 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 E9PMD0 336 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 SLC26A4O43511 780 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 ST18O60284 1047 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 HIP1RO75146 1068 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 B3GAT3O94766 335 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 MCF2P10911 925 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 SRFP11831 508 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 YARSP54577 528 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 PEX3P56589 373 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 ATP2C1P98194 919 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 MAPK7Q13164 816 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 ARL6IP4Q66PJ3 421 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 ANKS3Q6ZW76 656 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 TAS1R3Q7RTX0 852 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 HASPINQ8TF76 798 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 ATOH1Q92858 354 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 CCDC94Q9BW85 323 aaPredicted RBP14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 CDT1Q9H211 546 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 KMT5AQ9NQR1 393 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 SLC38A7Q9NVC3 462 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 MTRRQ9UBK8 725 aa14.63□□□□□ -0.07
AMBRA1-210ENST00000531542 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 ABLIM1O14639 778 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 KCNE1P15382 129 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 LIG1P18858 919 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 SCP2P22307 547 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 NBL1P41271 181 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 CLCNKBP51801 687 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 LIN9Q5TKA1 542 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 CEP57Q86XR8 500 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 SYT2Q8N9I0 419 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 POLD4Q9HCU8 107 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 SLC2A4RGQ9NR83 387 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 FBXL21Q9UKT6 434 aa14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.62□□□□□ -0.07
AMBRA1-210ENST00000531542 PP2D1A8MPX8 630 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms