RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ARHGAP8P85298 464 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 SPEM2Q0P670 501 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 AMHR2Q16671 573 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PRR23BQ6ZRT6 265 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 RUFY3Q7L099 469 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 NOSTRINQ8IVI9 506 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PIGOQ8TEQ8 1089 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 HAS1Q92839 578 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PLA2G2FQ9BZM2 168 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 POLR3FQ9H1D9 316 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 KCNMB3Q9NPA1 279 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 XPNPEP1Q9NQW7 623 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 DNMT3BQ9UBC3 853 aaKnown RBP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 USP20Q9Y2K6 914 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 MRPS17Q9Y2R5 130 aaKnown RBP10.23□□□□□ -0.77
NEDD8-206ENST00000531430 GDAQ9Y2T3 454 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 PCDHGA2Q9Y5H1 932 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 CYP46A1Q9Y6A2 500 aa10.23□□□□□ -0.77
NEDD8-206ENST00000531430 A0A1B0GUA9 196 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 DGAT1O75907 488 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
NEDD8-206ENST00000531430 PTPN2P17706 415 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 TXKP42681 527 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 LMNB2Q03252 620 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 MTAPQ13126 283 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 TOB2Q14106 344 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-206ENST00000531430 GRM2Q14416 872 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 TANGO2Q6ICL3 276 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 ZBTB8OSQ8IWT0 167 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 GPR65Q8IYL9 337 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 DAGLBQ8NCG7 672 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 KCNB2Q92953 911 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 BORCS6Q96GS4 357 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 NAP1L4Q99733 375 aaKnown RBP10.22□□□□□ -0.77
NEDD8-206ENST00000531430 OSBPL6Q9BZF3 934 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 BRD9Q9H8M2 597 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 GPRC5CQ9NQ84 441 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 CDY1Q9Y6F8 540 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 COL4A3Q01955 1670 aa10.22□□□□□ -0.77
NEDD8-206ENST00000531430 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 I3L4J1 428 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 PRRG1O14668 218 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 TBX3O15119 743 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 TBC1D4O60343 1298 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 B3GAT3O94766 335 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 LRG1P02750 347 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 RHOP08100 348 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ATP2B1P20020 1258 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 POU5F1BQ06416 359 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ADCY1Q08828 1119 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ELAVL2Q12926 359 aaKnown RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 RAB33AQ14088 237 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 NPY5RQ15761 445 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 CALCRLQ16602 461 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 UVSSAQ2YD98 709 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 PDXDC1Q6P996 788 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 RSPO2Q6UXX9 243 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 FBXL16Q8N461 479 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ZNF274Q96GC6 653 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 CORO1BQ9BR76 489 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 RTKNQ9BST9 563 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 DDX23Q9BUQ8 820 aaKnown RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 POLD4Q9HCU8 107 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 ANKEF1Q9NU02 776 aa10.21□□□□□ -0.77
NEDD8-206ENST00000531430 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-206ENST00000531430 EPG5Q9HCE0 2579 aa10.21□□□□□ -0.78
NEDD8-206ENST00000531430 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.78
NEDD8-206ENST00000531430 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 MAN2B1O00754 1011 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 N4BP3O15049 544 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 CACNA1GO43497 2377 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 RECQL4O94761 1208 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 IGFBP6P24592 240 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-206ENST00000531430 MAGEA9P43362 315 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 FOSBP53539 338 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 NRLP54845 237 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 EVCP57679 992 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 NID2Q14112 1375 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 PPP2R5DQ14738 602 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 ST3GAL2Q16842 350 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 GLRA4Q5JXX5 417 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-206ENST00000531430 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 ZBTB44Q8NCP5 570 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 DEPTORQ8TB45 409 aa10.2□□□□□ -0.78
NEDD8-206ENST00000531430 TTC12Q9H892 705 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-206ENST00000531430 ZSWIM6Q9HCJ5 1215 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms