RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MFSD1Q9H3U5 465 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 C17orf75Q9HAS0 396 aa24.48■■□□□ 1.51
TRAPPC4-210ENST00000531290 CLUHO75153 1309 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 MCM2P49736 904 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 DCLRE1AQ6PJP8 1040 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 C1orf186Q6ZWK4 172 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 DAW1Q8N136 415 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 PIK3R5Q8WYR1 880 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 ZNF707Q96C28 371 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 ACO2Q99798 780 aaKnown RBP24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 TCHPQ9BT92 498 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 MMTAG2Q9BU76 263 aaKnown RBP24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 TIPINQ9BVW5 301 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 CCDC94Q9BW85 323 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 PRKD2Q9BZL6 878 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 KCNK12Q9HB15 430 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 IGSF9Q9P2J2 1179 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 KCNG1Q9UIX4 513 aa24.47■■□□□ 1.51
TRAPPC4-210ENST00000531290 B3GAT3O94766 335 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 ATP2C1P98194 919 aaPredicted RBP24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 PSMD5Q16401 504 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 ZNF568Q3ZCX4 644 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 GLRA4Q5JXX5 417 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 KCTD17Q8N5Z5 321 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 LNX1Q8TBB1 728 aaPredicted RBP24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 CDK5RAP3Q96JB5 506 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 CLSTN3Q9BQT9 956 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 IRF2BPLQ9H1B7 796 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 TOPORSQ9NS56 1045 aaPredicted RBP24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
TRAPPC4-210ENST00000531290 WDFY4Q6ZS81 3184 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 SFI1A8K8P3 1242 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 ZMYND10O75800 440 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 GRM5P41594 1212 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 NUBP1P53384 320 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 KCNK18Q7Z418 384 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 UROC1Q96N76 676 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 PPP1R10Q96QC0 940 aaKnown RBP24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 TARS2Q9BW92 718 aaKnown RBP24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 CDT1Q9H211 546 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
TRAPPC4-210ENST00000531290 VWA3AA6NCI4 1184 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 TRAPPC3O43617 180 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 PAPLNO95428 1278 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 GUCY2CP25092 1073 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 OSTNP61366 133 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 TCF15Q12870 199 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 LIN9Q5TKA1 542 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 PLIN2Q99541 437 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 PTPRHQ9HD43 1115 aa24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.44■■□□□ 1.5
TRAPPC4-210ENST00000531290 SMIM28A0A1B0GU29 152 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 TMEM189-UBE2V1I3L0A0 370 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 SLC16A4O15374 487 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 N4BP1O75113 896 aaKnown RBP24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 CD2BP2O95400 341 aaKnown RBP24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 CLCNKBP51801 687 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 SMTNP53814 917 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 RAD51AP2Q09MP3 1159 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 STRN3Q13033 797 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 MAPK7Q13164 816 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 HYIQ5T013 277 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 ARL6IP4Q66PJ3 421 aaKnown RBP24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 CEP120Q8N960 986 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 SYT2Q8N9I0 419 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 ACAP3Q96P50 834 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 SLC38A7Q9NVC3 462 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 EPS15L1Q9UBC2 864 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 FBXL21Q9UKT6 434 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 DUSP12Q9UNI6 340 aa24.43■■□□□ 1.5
TRAPPC4-210ENST00000531290 MCF2P10911 925 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 UPP1Q16831 310 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 LARP1BQ659C4 914 aaKnown RBP24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 ASTLQ6HA08 431 aaPredicted RBP24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 TAS1R3Q7RTX0 852 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 SPIRE2Q8WWL2 714 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 NXPE3Q969Y0 559 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 DDX27Q96GQ7 796 aaKnown RBP24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 PNMA5Q96PV4 448 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 MYADMQ96S97 322 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 FBXW11Q9UKB1 542 aa24.42■■□□□ 1.5
TRAPPC4-210ENST00000531290 PIEZO1Q92508 2521 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 HNRNPA1P09651 372 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 PLA2G4BP0C869 781 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 PLS3P13797 630 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 FGFR3P22607 806 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 CLCN5P51795 746 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 PPM1LQ5SGD2 360 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 MPZL3Q6UWV2 235 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 ALKAL1Q6UXT8 129 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 GET4Q7L5D6 327 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 FLCNQ8NFG4 579 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 GOLGA2P5Q9HBQ8 144 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 KCND2Q9NZV8 630 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 ZNF318Q5VUA4 2279 aa24.41■■□□□ 1.5
TRAPPC4-210ENST00000531290 ADAM12O43184 909 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms