RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, human

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT46-208	ENST00000531201	TMEM132B	Q14DG7	1078 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PSMD6	Q15008	389 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	TRADD	Q15628	312 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	UAP1	Q16222	522 aa	Predicted RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PTPRO	Q16827	1216 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	SH3D19	Q5HYK7	790 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	ACAD10	Q6JQN1	1059 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PPP1R2P3	Q6NXS1	205 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	CATSPERG	Q6ZRH7	1159 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	ZSWIM2	Q8NEG5	633 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	CHST13	Q8NET6	341 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	DNER	Q8NFT8	737 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	POMGNT1	Q8WZA1	660 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	DDX1	Q92499	740 aa	Known RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	SAAL1	Q96ER3	474 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	FMO2	Q99518	471 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	ERP44	Q9BS26	406 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	NEUROG2	Q9H2A3	272 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	A1CF	Q9NQ94	594 aa	Known RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	TMOD4	Q9NZQ9	345 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PARP2	Q9UGN5	583 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	RRP15	Q9Y3B9	282 aa	Known RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PCDHA3	Q9Y5H8	950 aa		10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	DICER1	Q9UPY3	1922 aa	Known RBP	10.13	□□□□□ -0.79
IFT46-208	ENST00000531201	PODXL	O00592	558 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	HNRNPDL	O14979	420 aa	Known RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	ATG7	O95352	703 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	MME	P08473	750 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	MYZAP	P0CAP1	466 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	NAMPT	P43490	491 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	FNTA	P49354	379 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	BPIFB4	P59827	614 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	CLEC16A	Q2KHT3	1053 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	CEP85L	Q5SZL2	805 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	TRIM72	Q6ZMU5	477 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	SV2A	Q7L0J3	742 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	SAMD7	Q7Z3H4	446 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	SLC47A2	Q86VL8	602 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	JAML	Q86YT9	394 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	C12orf50	Q8NA57	414 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	TAS1R2	Q8TE23	839 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	RNF166	Q96A37	237 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	CCDC127	Q96BQ5	260 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	ZNF653	Q96CK0	615 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	SH2D3A	Q9BRG2	576 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	PAGR1	Q9BTK6	254 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	KIFC3	Q9BVG8	833 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	PLVAP	Q9BX97	442 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	C1orf112	Q9NSG2	853 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	ZDHHC18	Q9NUE0	388 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	HOXC10	Q9NYD6	342 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	MTUS1	Q9ULD2	1270 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	PPME1	Q9Y570	386 aa		10.12	□□□□□ -0.79
IFT46-208	ENST00000531201	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	OAT	P04181	439 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	NUDT17	P0C025	328 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	COMT	P21964	271 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	USP8	P40818	1118 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	RFC5	P40937	340 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	PTGIR	P43119	386 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	HMGCS2	P54868	508 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	ZNF844	Q08AG5	666 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	ZNF211	Q13398	564 aa	Predicted RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	EMC2	Q15006	297 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	ZACN	Q401N2	412 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	DNAJC21	Q5F1R6	531 aa	Known RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	SLFN12L	Q6IEE8	588 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	SWSAP1	Q6NVH7	229 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	TAS1R3	Q7RTX0	852 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	CROCCP2	Q86T23	111 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	SPATS2	Q86XZ4	545 aa	Known RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	PRELID2	Q8N945	189 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	PSPC1	Q8WXF1	523 aa	Known RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	KRT35	Q92764	455 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	SLCO2A1	Q92959	643 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	ZBTB9	Q96C00	473 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	KLRG1	Q96E93	195 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	NUP85	Q9BW27	656 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	MTFR1L	Q9H019	292 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	PORCN	Q9H237	461 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	DHX33	Q9H6R0	707 aa	Known RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	ERVK-5	Q9HDB9	667 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	SCAF8	Q9UPN6	1271 aa	Known RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	OTOF	Q9HC10	1997 aa		10.11	□□□□□ -0.79
IFT46-208	ENST00000531201	IGKV6D-21	A0A0A0MT36	114 aa		10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	MYO1F	O00160	1098 aa		10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	SPOP	O43791	374 aa		10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	GRIN3B	O60391	1043 aa		10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	LDHA	P00338	332 aa	Known RBP	10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	UNG	P13051	313 aa	Predicted RBP	10.1	□□□□□ -0.79
IFT46-208	ENST00000531201	SLC1A1	P43005	524 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms