RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 KIAA0391O15091 583 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 EPHB6O15197 1021 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 TGFB1I1O43294 461 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 CHMP2AO43633 222 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 EIF3JO75822 258 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 AKAP3O75969 853 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PRPF6O94906 941 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 MYBP10242 640 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 ARP10275 920 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 LMNB1P20700 586 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PON1P27169 355 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 HOXD13P35453 343 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 STAT1P42224 750 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 RARRES1P49788 294 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 KLK7P49862 253 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 CASP5P51878 434 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 NPEPPSP55786 919 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 POLR2FP61218 127 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 MAPK7Q13164 816 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 RAPGEF1Q13905 1077 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 CTTNQ14247 550 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 NAB2Q15742 525 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 GLE1Q53GS7 698 aaKnown RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 KLHDC7AQ5VTJ3 777 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 ARHGEF16Q5VV41 709 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 CC2D1AQ6P1N0 951 aaPredicted RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 VSIG10LQ86VR7 867 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 MCPH1Q8NEM0 835 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 CHST13Q8NET6 341 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 DNERQ8NFT8 737 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PIGOQ8TEQ8 1089 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 SMCR8Q8TEV9 937 aaPredicted RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 TBC1D5Q92609 795 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 EEF2KMTQ96G04 330 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 FIZ1Q96SL8 496 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 RMDN3Q96TC7 470 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PARD6BQ9BYG5 372 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 FGFBP2Q9BYJ0 223 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 GLIS2Q9BZE0 524 aaPredicted RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 LACRTQ9GZZ8 138 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 ACAD9Q9H845 621 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 AGPAT3Q9NRZ7 376 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 RNF146Q9NTX7 359 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 GPRC5DQ9NZD1 345 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 HYOU1Q9Y4L1 999 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 PCDHGC5Q9Y5F6 944 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 MAFBQ9Y5Q3 323 aaPredicted RBP6.05□□□□□ -1.44
PCF11-205ENST00000530906 ZHX2Q9Y6X8 837 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 A0A0G2JMZ2 1700 aa6.05□□□□□ -1.44
PCF11-205ENST00000530906 RSPH10B2B2RC85 870 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 K7ENM7 598 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 ZNF263O14978 683 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 HIP1RO75146 1068 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 RGS9O75916 674 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 ZBTB7AO95365 584 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 MAP3K6O95382 1288 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 PSAPP07602 524 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 RSPH10BP0C881 870 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 PNMA6AP0CW24 399 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 NFKB1P19838 968 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 YWHABP31946 246 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 GTF2H1P32780 548 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 ICAM3P32942 547 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 PAFAH1B1P43034 410 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 FMO5P49326 533 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 NCKAP1LP55160 1127 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 JAM2P57087 298 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 MRPS9P82933 396 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 GTF2BQ00403 316 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 RAD51AP2Q09MP3 1159 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 BFSP1Q12934 665 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 SPP2Q13103 211 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 ITGB3BPQ13352 177 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 NAA30Q147X3 362 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 NBPF12Q5TAG4 269 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 TCERG1LQ5VWI1 586 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 CATSPERGQ6ZRH7 1159 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 SYCP3Q8IZU3 236 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 SYCE1Q8N0S2 351 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 CPXCR1Q8N123 301 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 MMGT1Q8N4V1 131 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 EIF1ADQ8N9N8 165 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 XXYLT1Q8NBI6 393 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 REPS2Q8NFH8 660 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 CAGE1Q8TC20 777 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.04□□□□□ -1.44
PCF11-205ENST00000530906 MPHOSPH6Q99547 160 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 NTPCRQ9BSD7 190 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 MOV10L1Q9BXT6 1211 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 STK33Q9BYT3 514 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 VIPAS39Q9H9C1 493 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 KIAA1586Q9HCI6 787 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 RAVER2Q9HCJ3 691 aaKnown RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 NLRC4Q9NPP4 1024 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 GCNT4Q9P109 453 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 COL20A1Q9P218 1284 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.04□□□□□ -1.44
PCF11-205ENST00000530906 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms