RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PPP2R3BQ9Y5P8 575 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 TMEM110-MUSTN1A8MSY1 372 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 ATG7O95352 703 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 PIGRP01833 764 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 LSP1P33241 339 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 PTGIRP43119 386 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 SOX10P56693 466 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 STRN3Q13033 797 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 WDR44Q5JSH3 913 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 NOL9Q5SY16 702 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 TAS1R3Q7RTX0 852 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 SPATS2Q86XZ4 545 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 MAGOHBQ96A72 148 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 EPN3Q9H201 632 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 AVENQ9NQS1 362 aaPredicted RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 PCDHB2Q9Y5E7 798 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 MAFBQ9Y5Q3 323 aaPredicted RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 MYO1FO00160 1098 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 CCT5P48643 541 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 MARCKSL1P49006 195 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 FNTAP49354 379 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 POLGP54098 1239 aaPredicted RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 CORO7P57737 925 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 EMC2Q15006 297 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 STXBP2Q15833 593 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 SLFN12LQ6IEE8 588 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 ADAT2Q7Z6V5 191 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 SLC13A5Q86YT5 568 aaPredicted RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 C12orf50Q8NA57 414 aaPredicted RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 PSPC1Q8WXF1 523 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 GLG1Q92896 1179 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 KLRG1Q96E93 195 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 FNBP1Q96RU3 617 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 ACP6Q9NPH0 428 aa18.45■□□□□ 0.54
BRCA2-204ENST00000530893 CNOT8Q9UFF9 292 aaKnown RBP18.45■□□□□ 0.54
BRCA2-204ENST00000530893 DOCK5Q9H7D0 1870 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 LDHAP00338 332 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 NUDT17P0C025 328 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 PYGMP11217 842 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 UNGP13051 313 aaPredicted RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 NAMPTP43490 491 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 ZACNQ401N2 412 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 CCDC137Q6PK04 289 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 B4GALNT4Q76KP1 1039 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 CHST13Q8NET6 341 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 TATDN2Q93075 761 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 C18orf8Q96DM3 657 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 NDUFAB1O14561 156 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 KRT5P13647 590 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 SLC1A1P43005 524 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 IRX5P78411 483 aaPredicted RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 ANGEL2Q5VTE6 544 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 CROCCP2Q86T23 111 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 TRIM31Q9BZY9 425 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 PORCNQ9H237 461 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 RASSF4Q9H2L5 321 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 PABPC3Q9H361 631 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 DHX33Q9H6R0 707 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 MTRF1LQ9UGC7 380 aaKnown RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 FEZ2Q9UHY8 353 aaPredicted RBP18.44■□□□□ 0.54
BRCA2-204ENST00000530893 SIP14410 1827 aa18.44■□□□□ 0.54
BRCA2-204ENST00000530893 ATXN2Q99700 1313 aaKnown RBP18.43■□□□□ 0.54
BRCA2-204ENST00000530893 SPDYE16A6NNV3 312 aaPredicted RBP18.43■□□□□ 0.54
BRCA2-204ENST00000530893 OATP04181 439 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 COPB2P35606 906 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 MTERF2Q49AM1 385 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 SH3D19Q5HYK7 790 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 TTC19Q6DKK2 380 aaPredicted RBP18.43■□□□□ 0.54
BRCA2-204ENST00000530893 PPP1R2P3Q6NXS1 205 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 AADACL2Q6P093 401 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 CYFIP1Q7L576 1253 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 HOOK3Q86VS8 718 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 OR2W6PQ8NHA6 318 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 MAIP1Q8WWC4 291 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 SLCO2A1Q92959 643 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 ZNF302Q9NR11 478 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 AGO2Q9UKV8 859 aaKnown RBP18.43■□□□□ 0.54
BRCA2-204ENST00000530893 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
BRCA2-204ENST00000530893 C4BPAP04003 597 aaKnown RBP18.42■□□□□ 0.54
BRCA2-204ENST00000530893 COILP38432 576 aaPredicted RBP18.42■□□□□ 0.54
BRCA2-204ENST00000530893 GUCY1A3Q02108 690 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 IFFO1Q0D2I5 559 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 PTGISQ16647 500 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 ZDHHC24Q6UX98 284 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 ZNF516Q92618 1163 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 PAGR1Q9BTK6 254 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 NIFKQ9BYG3 293 aaKnown RBP18.42■□□□□ 0.54
BRCA2-204ENST00000530893 CENPHQ9H3R5 247 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 LRRC19Q9H756 370 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 AFG3L2Q9Y4W6 797 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 LCTP09848 1927 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 TNNI1P19237 187 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 MAGEA9P43362 315 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 PMS2P54278 862 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 PLTPP55058 493 aa18.42■□□□□ 0.54
BRCA2-204ENST00000530893 SP4Q02446 784 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms