RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	EIF2B4	Q9UI10	523 aa	Known RBP	5.1	□□□□□ -1.59
NUP214-223	ENST00000530843	ING1	Q9UK53	422 aa	Predicted RBP	5.1	□□□□□ -1.59
NUP214-223	ENST00000530843	LIMCH1	Q9UPQ0	1083 aa		5.1	□□□□□ -1.59
NUP214-223	ENST00000530843	NOP58	Q9Y2X3	529 aa	Known RBP	5.1	□□□□□ -1.59
NUP214-223	ENST00000530843	IPP	Q9Y573	584 aa		5.1	□□□□□ -1.59
NUP214-223	ENST00000530843	FAM171A2	A8MVW0	826 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	PJA2	O43164	708 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	HTRA2	O43464	458 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	RAP2A	P10114	183 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	RNASE9	P60153	205 aa	Known RBP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	TARDBP	Q13148	414 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	MTM1	Q13496	603 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	IL10RA	Q13651	578 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	C3orf36	Q3SXR2	165 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	GJC2	Q5T442	439 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	EFCAB12	Q6NXP0	572 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	ZFPM1	Q8IX07	1006 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	ZNF276	Q8N554	614 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	ZNF483	Q8TF39	744 aa	Predicted RBP	5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	KRTAP4-5	Q9BYR2	181 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	SLC13A1	Q9BZW2	595 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	POGK	Q9P215	609 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	CLCA2	Q9UQC9	943 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	PCDHA13	Q9Y5I0	950 aa		5.09	□□□□□ -1.59
NUP214-223	ENST00000530843	DRGX	A6NNA5	263 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	PEX11B	O96011	259 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	SNRPA1	P09661	255 aa	Known RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	IL2RB	P14784	551 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	ZSCAN20	P17040	1043 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	CHN2	P52757	468 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	KIF23	Q02241	960 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	OTUD7B	Q6GQQ9	843 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	RHOU	Q7L0Q8	258 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	PNMA8A	Q86V59	439 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	RHOT1	Q8IXI2	618 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	DCBLD1	Q8N8Z6	715 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	SLC25A43	Q8WUT9	341 aa	Predicted RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	STAG1	Q8WVM7	1258 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	CASKIN2	Q8WXE0	1202 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	COA7	Q96BR5	231 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	CLIP3	Q96DZ5	547 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	C7orf25	Q9BPX7	421 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	NRDE2	Q9H7Z3	1164 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	FBXO34	Q9NWN3	711 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	MOCS1	Q9NZB8	636 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	TRPM5	Q9NZQ8	1165 aa		5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	RUVBL1	Q9Y265	456 aa	Known RBP	5.08	□□□□□ -1.6
NUP214-223	ENST00000530843	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	CCDC154	A6NI56	674 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	GPR32	O75388	356 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	NCR1	O76036	304 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	PRSS23	O95084	383 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	ATP5J	P18859	108 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	SLC6A2	P23975	617 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	GDF5	P43026	501 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	PDCD4	Q53EL6	469 aa	Known RBP	5.07	□□□□□ -1.6
NUP214-223	ENST00000530843		Q6ZPA2	131 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	ZNF627	Q7L945	461 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	GDF7	Q7Z4P5	450 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	MRGPRE	Q86SM8	312 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	ZFP28	Q8NHY6	868 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	LARP4B	Q92615	738 aa	Known RBP	5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	KAT5	Q92993	513 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	PHACTR3	Q96KR7	559 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	PCED1A	Q9H1Q7	454 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	TMEM140	Q9NV12	185 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	REXO2	Q9Y3B8	237 aa	Known RBP	5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	MRFAP1	Q9Y605	127 aa		5.07	□□□□□ -1.6
NUP214-223	ENST00000530843	CCDC78	A2IDD5	438 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	DDC	P20711	480 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	IBSP	P21815	317 aa	Predicted RBP	5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	MGAT1	P26572	445 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	SLC16A1	P53985	500 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	ABHD18	Q0P651	414 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	RRP12	Q5JTH9	1297 aa	Known RBP	5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	EFCAB2	Q5VUJ9	269 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	ZNF529	Q6P280	563 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	SEM1	Q6ZVN7	128 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	MED25	Q71SY5	747 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	UBE3B	Q7Z3V4	1068 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	CYFIP2	Q96F07	1278 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	DMRTA2	Q96SC8	542 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	DCLRE1C	Q96SD1	692 aa	Known RBP	5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	MLST8	Q9BVC4	326 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	SLC46A2	Q9BY10	475 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	MANSC1	Q9H8J5	431 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	DKK2	Q9UBU2	259 aa		5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	USP15	Q9Y4E8	981 aa	Predicted RBP	5.06	□□□□□ -1.6
NUP214-223	ENST00000530843	hCG_2014768	A0A024R1R8	64 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	CYR61	O00622	381 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	LPXN	O60711	386 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	RECQL4	O94761	1208 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	ITGB1	P05556	798 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	MAK	P20794	623 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	MCM7	P33993	719 aa		5.05	□□□□□ -1.6
NUP214-223	ENST00000530843	EXOSC10	Q01780	885 aa	Known RBP	5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms