RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SPTY2D1Q68D10 685 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-213ENST00000530784 IQSEC1Q6DN90 963 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 CMTM4Q8IZR5 234 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 OR14C36Q8NHC7 312 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 RSAD2Q8WXG1 361 aa9.36□□□□□ -0.91
CSDE1-213ENST00000530784 HECAQ9UBI9 543 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-213ENST00000530784 NRXN1Q9ULB1 1477 aa9.35□□□□□ -0.91
CSDE1-213ENST00000530784 HIBADHP31937 336 aaKnown RBP9.35□□□□□ -0.91
CSDE1-213ENST00000530784 NRG3P56975 720 aa9.35□□□□□ -0.91
CSDE1-213ENST00000530784 FSCN1Q16658 493 aaKnown RBP9.35□□□□□ -0.91
CSDE1-213ENST00000530784 UGT8Q16880 541 aa9.35□□□□□ -0.91
CSDE1-213ENST00000530784 WDR66Q8TBY9 1149 aa9.35□□□□□ -0.91
CSDE1-213ENST00000530784 ACAP3Q96P50 834 aa9.35□□□□□ -0.91
CSDE1-213ENST00000530784 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
CSDE1-213ENST00000530784 SPATA31A3Q5VYP0 1347 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 MARF1Q9Y4F3 1742 aaKnown RBP9.34□□□□□ -0.91
CSDE1-213ENST00000530784 TNS3Q68CZ2 1445 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 A0A1W2PR48 441 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 CAPN14A8MX76 684 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 PLSCR1O15162 318 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 GPR39O43194 453 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 GLB1L2Q8IW92 636 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 EXTL1Q92935 676 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 TMX1Q9H3N1 280 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 EDARQ9UNE0 448 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 SBNO2Q9Y2G9 1366 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
CSDE1-213ENST00000530784 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.92
CSDE1-213ENST00000530784 SLIT2O94813 1529 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 GOLGA8AA7E2F4 631 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 ENPP1P22413 925 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 NPEPPSP55786 919 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 USP39Q53GS9 565 aaKnown RBP9.33□□□□□ -0.92
CSDE1-213ENST00000530784 TAS1R1Q7RTX1 841 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 MSL3Q8N5Y2 521 aaKnown RBP9.33□□□□□ -0.92
CSDE1-213ENST00000530784 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 TGFBRAP1Q8WUH2 860 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 LMBR1Q8WVP7 490 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 RALGAPBQ86X10 1494 aa9.33□□□□□ -0.92
CSDE1-213ENST00000530784 DLC1Q96QB1 1528 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 SCAND1P57086 179 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.32□□□□□ -0.92
CSDE1-213ENST00000530784 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 FKBP15Q5T1M5 1219 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 UNC5CLQ8IV45 518 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 ARL8AQ96BM9 186 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 PRAM1Q96QH2 718 aa9.32□□□□□ -0.92
CSDE1-213ENST00000530784 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
CSDE1-213ENST00000530784 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 DNAJC6O75061 913 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 STC2O76061 302 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 PRKD3O94806 890 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 AMHP03971 560 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 ACRV1P26436 265 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 SPIDRQ14159 915 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 ELAVL1Q15717 326 aaKnown RBP9.31□□□□□ -0.92
CSDE1-213ENST00000530784 SPATS2Q86XZ4 545 aaKnown RBP9.31□□□□□ -0.92
CSDE1-213ENST00000530784 COG1Q8WTW3 980 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 C14orf119Q9NWQ9 140 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 POGKQ9P215 609 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 DPP7Q9UHL4 492 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 SBNO1A3KN83 1393 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 ARHGEF10O15013 1369 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 ADGRB2O60241 1585 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 GLI3P10071 1580 aa9.31□□□□□ -0.92
CSDE1-213ENST00000530784 CASRP41180 1078 aa9.3□□□□□ -0.92
CSDE1-213ENST00000530784 RNF219Q5W0B1 726 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-213ENST00000530784 RNF207Q6ZRF8 634 aa9.3□□□□□ -0.92
CSDE1-213ENST00000530784 ANKRD35Q8N283 1001 aa9.3□□□□□ -0.92
CSDE1-213ENST00000530784 AHCYL2Q96HN2 611 aaKnown RBP9.3□□□□□ -0.92
CSDE1-213ENST00000530784 ZNF512Q96ME7 567 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-213ENST00000530784 ENKD1Q9H0I2 346 aa9.3□□□□□ -0.92
CSDE1-213ENST00000530784 GIT1Q9Y2X7 761 aa9.3□□□□□ -0.92
CSDE1-213ENST00000530784 ADGRB1O14514 1584 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
CSDE1-213ENST00000530784 NRP1O14786 923 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 TMEM127O75204 238 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 CFBP00751 764 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 LTA4HP09960 611 aaKnown RBP9.29□□□□□ -0.92
CSDE1-213ENST00000530784 FAPQ12884 760 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 ZNF662Q6ZS27 426 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 C1orf210Q8IVY1 113 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-213ENST00000530784 OR5M3Q8NGP4 307 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 MIEF2Q96C03 454 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 RAX2Q96IS3 184 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 ZNF747Q9BV97 191 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 KRTAP4-11Q9BYQ6 195 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 BLMP54132 1417 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-213ENST00000530784 PLCH1Q4KWH8 1693 aa9.29□□□□□ -0.92
CSDE1-213ENST00000530784 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
CSDE1-213ENST00000530784 PRAMEF4O60810 478 aa9.28□□□□□ -0.92
CSDE1-213ENST00000530784 CDK17Q00537 523 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms