RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 PLEKHG4Q58EX7 1191 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 C1orf220Q5T0J3 134 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 INTS8Q75QN2 995 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 BRSK2Q8IWQ3 736 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 ACAP3Q96P50 834 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 LGALS16A8MUM7 142 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 LACTBL1A8MY62 500 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 KIAA0355O15063 1070 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 LDHAP00338 332 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 TIMP1P01033 207 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 TPM2P07951 284 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 NFICP08651 508 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CLTAP09496 248 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 TNNI1P19237 187 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 GRM5P41594 1212 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 MARSP56192 900 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 TFAMQ00059 246 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 APBA1Q02410 837 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 KCNH2Q12809 1159 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 SCARA3Q6AZY7 606 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 SARM1Q6SZW1 724 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 APBB1IPQ7Z5R6 666 aaPredicted RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 RTN4RL1Q86UN2 441 aaPredicted RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 OR5B17Q8NGF7 314 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 SEPT8Q92599 483 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 CCDC51Q96ER9 411 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 NDST4Q9H3R1 872 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 METTL14Q9HCE5 456 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 PRKAG2Q9UGJ0 569 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 RANBP2P49792 3224 aaKnown RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 KIAA0391O15091 583 aaKnown RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 LRRN2O75325 713 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 ATF7P17544 494 aaPredicted RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 MLH1P40692 756 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 MYL7Q01449 175 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 PPP2R3AQ06190 1150 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 PSMD6Q15008 389 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 SLC10A6Q3KNW5 377 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 FILIP1LQ4L180 1135 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 JADE1Q6IE81 842 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 PARD3BQ8TEW8 1205 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 VWCEQ96DN2 955 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 PCMTD1Q96MG8 357 aaPredicted RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 MTMR12Q9C0I1 747 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 KIAA1586Q9HCI6 787 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
SOX6-213ENST00000530378 CHST12Q9NRB3 414 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 INPP5FQ9Y2H2 1132 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 SQORQ9Y6N5 450 aa11.55□□□□□ -0.56
SOX6-213ENST00000530378 EVI5O60447 810 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 ITGA4P13612 1032 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 CAPN2P17655 700 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 FMO5P49326 533 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
SOX6-213ENST00000530378 YARSP54577 528 aaKnown RBP11.54□□□□□ -0.56
SOX6-213ENST00000530378 BIRC3Q13489 604 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 TMCO2Q7Z6W1 182 aaPredicted RBP11.54□□□□□ -0.56
SOX6-213ENST00000530378 DRC7Q8IY82 874 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 ZNF516Q92618 1163 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 DPF3Q92784 378 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 BADQ92934 168 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 SNX27Q96L92 541 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 GAD1Q99259 594 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 CGRRF1Q99675 332 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 PTPRSQ13332 1948 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 TTC3P53804 2025 aa11.54□□□□□ -0.56
SOX6-213ENST00000530378 MAPK13O15264 365 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 CXCL10P02778 98 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 FGFR1P11362 822 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 GATMP50440 423 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 MXI1P50539 228 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 NR1I3Q14994 352 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 SYCP1Q15431 976 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 HABP4Q5JVS0 413 aaKnown RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 FKBP15Q5T1M5 1219 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 MFSD5Q6N075 450 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMC6Q7Z403 805 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 C18orf25Q96B23 403 aaPredicted RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms